RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	RAG2	P55895	527 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	ZP1	P60852	638 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	RPL6	Q02878	288 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	NHLRC3	Q5JS37	347 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	SLC27A4	Q6P1M0	643 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	IKBIP	Q70UQ0	350 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	KLHL36	Q8N4N3	616 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	BEST4	Q8NFU0	473 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	OR6M1	Q8NGM8	313 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	ERMAP	Q96PL5	475 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	RIOK2	Q9BVS4	552 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	CACNG6	Q9BXT2	260 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	DMRT3	Q9NQL9	472 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	COPZ2	Q9P299	210 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	ANKDD1B	A6NHY2	528 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	FOXE1	O00358	373 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	SOX30	O94993	753 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	TIMP1	P01033	207 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	IL3	P08700	152 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	DRD2	P14416	443 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	CTSC	P53634	463 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	PNLIPRP1	P54315	467 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	CDH11	P55287	796 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	FZD5	Q13467	585 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	ARSI	Q5FYB1	569 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	PYHIN1	Q6K0P9	492 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	TFAP2E	Q6VUC0	442 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	CFAP77	Q6ZQR2	320 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	ZNF687	Q8N1G0	1237 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	FTMT	Q8N4E7	242 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	LINC00471	Q8N535	108 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	UXS1	Q8NBZ7	420 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	OR2T35	Q8NGX2	323 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	OR52N1	Q8NH53	320 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	GIMAP1	Q8WWP7	306 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	KCTD12	Q96CX2	325 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	FNDC11	Q9BVV2	318 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	ZBP1	Q9H171	429 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	SEC14L3	Q9UDX4	400 aa		13.55	□□□□□ -0.24
RFX2-222	ENST00000592546	PPIE	Q9UNP9	301 aa	Known RBP	13.55	□□□□□ -0.24
RFX2-222	ENST00000592546		M0R3H8	397 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	TOX	O94900	526 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	CXCL14	O95715	111 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	KLK1	P06870	262 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	TYR	P14679	529 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	LCN1	P31025	176 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	EPHA4	P54764	986 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	POLR2L	P62875	67 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	ZMYND11	Q15326	602 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	KANSL1	Q7Z3B3	1105 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	KREMEN2	Q8NCW0	462 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	TEX47	Q8TBZ9	253 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	MARC2	Q969Z3	335 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	BTBD1	Q9H0C5	482 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	HCN3	Q9P1Z3	774 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	TMEM5	Q9Y2B1	443 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	HCFC2	Q9Y5Z7	792 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	RFXAP	O00287	272 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	TSPAN6	O43657	245 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	RGS9	O75916	674 aa	Predicted RBP	13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	UBXN7	O94888	489 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	IGHA1	P01876	353 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	H2AFB2	P0C5Z0	115 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	CTSA	P10619	480 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	UGT2B7	P16662	529 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	GSTM3	P21266	225 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	CCR6	P51684	374 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	ZDHHC20	Q5W0Z9	365 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	MEX3D	Q86XN8	651 aa	Known RBP	13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	KLB	Q86Z14	1044 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	SIAH3	Q8IW03	269 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	TOMM5	Q8N4H5	51 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	LMNTD1	Q8N9Z9	388 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	POF1B	Q8WVV4	589 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	YIPF5	Q969M3	257 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	SGTB	Q96EQ0	304 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	SLC38A2	Q96QD8	506 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	SLAMF7	Q9NQ25	335 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	MIEF1	Q9NQG6	463 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	POMT2	Q9UKY4	750 aa		13.54	□□□□□ -0.24
RFX2-222	ENST00000592546	C5orf42	Q9H799	3197 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	HMGN4	O00479	90 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	ZNF197	O14709	1029 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	NPC1	O15118	1278 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	CTSL	P07711	333 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	TIMP2	P16035	220 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	WASH2P	Q6VEQ5	465 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	OVCH2	Q7RTZ1	564 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	RASGEF1A	Q8N9B8	481 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	PTP4A1	Q93096	173 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	ZNF607	Q96SK3	696 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	PTGFRN	Q9P2B2	879 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	RASD1	Q9Y272	281 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	RNF13	O43567	381 aa		13.53	□□□□□ -0.24
RFX2-222	ENST00000592546	SSNA1	O43805	119 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms