RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 E9PBE3 544 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 RNASET2O00584 256 aaKnown RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 SCDO00767 359 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 POLR3GO15318 223 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 SLC22A3O75751 556 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 KCNK2O95069 426 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 TGDSO95455 350 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 HPNP05981 417 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 HOXD4P09016 255 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 RNF224P0DH78 156 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 GABRA1P14867 456 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 TCEA1P23193 301 aaKnown RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 ACVR2AP27037 513 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 PTPN6P29350 595 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 PTGDSP41222 190 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 UFM1P61960 85 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 HBA1P69905 142 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 PMPCAQ10713 525 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 DUSP5Q16690 384 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 GSTA3Q16772 222 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 FAM174BQ3ZCQ3 159 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 SLC9B1Q4ZJI4 515 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 SPANXN4Q5MJ08 99 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CDC73Q6P1J9 531 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 C6orf120Q7Z4R8 191 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CAMKMTQ7Z624 323 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 GALNT10Q86SR1 603 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 MARCH3Q86UD3 253 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 ANKRD46Q86W74 232 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 LURAP1LQ8IV03 231 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CHERPQ8IWX8 916 aaKnown RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CLECL1Q8IZS7 167 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 TRIML2Q8N7C3 387 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 FAM83FQ8NEG4 500 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 OR8J2Q8NGG1 315 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 ACTRT2Q8TDY3 377 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 DUSP19Q8WTR2 217 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 PHF10Q8WUB8 498 aaKnown RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 RND1Q92730 232 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CDS1Q92903 461 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 ABTB1Q969K4 478 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 TESCQ96BS2 214 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 SDCCAG3Q96C92 435 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 GIMAP5Q96F15 307 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 MARK4Q96L34 752 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 C7orf26Q96N11 449 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 OR52E6Q96RD3 313 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 STACQ99469 402 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 BTBD2Q9BX70 525 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 DSN1Q9H410 356 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 PIGUQ9H490 435 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 HHATLQ9HCP6 504 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 FAM120CQ9NX05 1096 aaKnown RBP9.19□□□□□ -0.94
BRCA1-227ENST00000591849 TAS2R10Q9NYW0 307 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 ABCG2Q9UNQ0 655 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CAMK2AQ9UQM7 478 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 SLC6A5Q9Y345 797 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 CRYBG3Q68DQ2 2970 aa9.19□□□□□ -0.94
BRCA1-227ENST00000591849 DUXAA6NLW8 204 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 FAM47E-STBD1D6RA91 191 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 PRSS44E7EML9 344 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 NDUFB5O43674 189 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 GMFGO60234 142 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 WDR1O75083 606 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 SASH3O75995 380 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ALDOCP09972 364 aaKnown RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 MATN1P21941 496 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 UQCRC2P22695 453 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 DPP4P27487 766 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 LCN1P31025 176 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 SRD5A2P31213 254 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ANXA11P50995 505 aaKnown RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 DGKQP52824 942 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 C17orf67Q0P5P2 114 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 LRRC74AQ0VAA2 488 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 GRAMD1BQ3KR37 738 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 PDCD4Q53EL6 469 aaKnown RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 CCNJQ5T5M9 372 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ATAD3BQ5T9A4 648 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 FNDC7Q5VTL7 733 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 AAGABQ6PD74 315 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 EPGNQ6UW88 154 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ENPP6Q6UWR7 440 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 B3GNT6Q6ZMB0 384 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF621Q6ZSS3 439 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 NCCRP1Q6ZVX7 275 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 PM20D2Q8IYS1 436 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 MIER2Q8N344 545 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ARFGAP2Q8N6H7 521 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 WDSUB1Q8N9V3 476 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF527Q8NB42 609 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 GLB1L3Q8NCI6 653 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 PSMA8Q8TAA3 256 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 CA5BP1Q8WTZ4 195 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 CKAP2Q8WWK9 683 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ITLN2Q8WWU7 325 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 ASB5Q8WWX0 329 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 SLC35G5Q96KT7 338 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 SFXN2Q96NB2 322 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms