RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 EIPR1Q53HC9 387 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 CT45A2Q5DJT8 189 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
RFX1-204ENST00000588885 C1orf185Q5T7R7 199 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 TIGD3Q6B0B8 471 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 NPSR1Q6W5P4 371 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 B3GNT6Q6ZMB0 384 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 YRDCQ86U90 279 aaKnown RBP10.55□□□□□ -0.72
RFX1-204ENST00000588885 POU5F2Q8N7G0 328 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 LILRB4Q8NHJ6 448 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 NEIL3Q8TAT5 605 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.55□□□□□ -0.72
RFX1-204ENST00000588885 ASB5Q8WWX0 329 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 TEX37Q96LM6 180 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 COL21A1Q96P44 957 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 TSSK3Q96PN8 268 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 SECISBP2Q96T21 854 aaKnown RBP10.55□□□□□ -0.72
RFX1-204ENST00000588885 TTYH2Q9BSA4 534 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 FOLH1BQ9HBA9 442 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 ACKR4Q9NPB9 350 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 MYNNQ9NPC7 610 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 SERHLQ9NQF3 203 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 SDR39U1Q9NRG7 319 aaPredicted RBP10.55□□□□□ -0.72
RFX1-204ENST00000588885 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 MAPRE3Q9UPY8 281 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 OR10H1Q9Y4A9 318 aa10.55□□□□□ -0.72
RFX1-204ENST00000588885 FREM3P0C091 2139 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 POLQO75417 2590 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 PRAMEF25A6NGN4 478 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 KDM4EB2RXH2 506 aaPredicted RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 NR5A2O00482 541 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ANKRD28O15084 1053 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 SLC22A2O15244 555 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 PLOD3O60568 738 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 PRPS2P11908 318 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 EFNA1P20827 205 aaPredicted RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 TCEA1P23193 301 aaKnown RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 IL12AP29459 219 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 NTSP30990 170 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ADH7P40394 386 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 PTGDSP41222 190 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ZFP36L2P47974 494 aaKnown RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 CPA2P48052 419 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 CDK9P50750 372 aaKnown RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 HCFC1P51610 2035 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 KRT72Q14CN4 511 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 AGKQ53H12 422 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 OR5M10Q6IEU7 315 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 MEX3BQ6ZN04 569 aaKnown RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 ZNF551Q7Z340 670 aaPredicted RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 SNX32Q86XE0 403 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ULK2Q8IYT8 1036 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ZNF295-AS1Q8N0V1 137 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 KRTCAP2Q8N6L1 136 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 OR1J4Q8NGS1 313 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 NUDT8Q8WV74 236 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 CIDECQ96AQ7 238 aaPredicted RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 EFHD2Q96C19 240 aaPredicted RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 METTL2AQ96IZ6 378 aaKnown RBP10.54□□□□□ -0.72
RFX1-204ENST00000588885 VSTM2LQ96N03 204 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 AMDHD1Q96NU7 426 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 BTBD9Q96Q07 612 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 TIMP4Q99727 224 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 OSBPL11Q9BXB4 747 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 GLIPR2Q9H4G4 154 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 KCNJ16Q9NPI9 418 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 QPCTLQ9NXS2 382 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 TAS2R9Q9NYW1 312 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ZIM2Q9NZV7 527 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 Q9UFV3 132 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 CAMK2AQ9UQM7 478 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 NINQ8N4C6 2090 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 ARHGAP21Q5T5U3 1957 aa10.54□□□□□ -0.72
RFX1-204ENST00000588885 AKAP9Q99996 3911 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 C17orf51A8MQB3 221 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 UPK1AO00322 258 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 TO15178 435 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 WDR1O75083 606 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 TOXO94900 526 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 HPNP05981 417 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 BMP7P18075 431 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 CAPN3P20807 821 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 PTPN6P29350 595 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 IL12BP29460 328 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 KRT20P35900 424 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 GSTM5P46439 218 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 RFX3P48380 749 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 HSPB3Q12988 150 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 CEBPEQ15744 281 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 SLC30A6Q6NXT4 461 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 CCDC121Q6ZUS5 278 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 FUNDC1Q8IVP5 155 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 WDSUB1Q8N9V3 476 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 FAM83FQ8NEG4 500 aaPredicted RBP10.53□□□□□ -0.72
RFX1-204ENST00000588885 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 TMEM41AQ96HV5 264 aa10.53□□□□□ -0.72
RFX1-204ENST00000588885 TRIM8Q9BZR9 551 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms