RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PTCHD1Q96NR3 888 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 FEVQ99581 238 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 NMNAT1Q9HAN9 279 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 RLIMQ9NVW2 624 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 DTX4Q9Y2E6 619 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 GPR55Q9Y2T6 319 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 ASPMQ8IZT6 3477 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 CENPVL1A0A0U1RR11 272 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 LOC100130705A0A1B0GUX0 176 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 SMNDC1O75940 238 aaKnown RBP eCLIP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 AK1P00568 194 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 CLPSP04118 112 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 RPS4Y1P22090 263 aaKnown RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 ARHGAP40Q5TG30 622 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 CACTIN-AS1Q8N1I8 211 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 PHF10Q8WUB8 498 aaKnown RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 TSLPQ969D9 159 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 CLIP3Q96DZ5 547 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 RMND5BQ96G75 393 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 ZNF578Q96N58 590 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 SLC7A5P2Q9GIP4 190 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 KRT84Q9NSB2 600 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 ERVK-19Q9WJR5 959 aa18.96■□□□□ 0.63
ATG4D-204ENST00000586417 ZNF443Q9Y2A4 671 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-204ENST00000586417 DPPA5A6NC42 116 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 AGAP5A6NIR3 686 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 E9PQ18 207 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 KIAA0513O60268 411 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 STX11O75558 287 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 IFNA16P05015 189 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 SDHBP21912 280 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 POU6F2P78424 691 aaPredicted RBP18.95■□□□□ 0.62
ATG4D-204ENST00000586417 RHAGQ02094 409 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 EIF3IQ13347 325 aaKnown RBP18.95■□□□□ 0.62
ATG4D-204ENST00000586417 DCAF12Q5T6F0 453 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 COX15Q7KZN9 410 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 TMPRSS7Q7RTY8 843 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF619Q8N2I2 560 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF615Q8N8J6 731 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 OR9Q2Q8NGE9 314 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 FAM122AQ96E09 287 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 ALPK1Q96QP1 1244 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 TAAR9Q96RI9 348 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 FUZQ9BT04 418 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 CNPPD1Q9BV87 410 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 GRIP2Q9C0E4 1043 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 AKIRIN1Q9H9L7 192 aaPredicted RBP18.95■□□□□ 0.62
ATG4D-204ENST00000586417 SLC22A11Q9NSA0 550 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 MYRFQ9Y2G1 1151 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 IFT52Q9Y366 437 aa18.95■□□□□ 0.62
ATG4D-204ENST00000586417 FREM2Q5SZK8 3169 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 TRBV4-1A0A0J9YWV2 114 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 TEX51A0A1B0GUA7 166 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 ARRDC5A6NEK1 342 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 C9orf172C9J069 976 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 PRAMEF2O60811 474 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 SEC24DO94855 1032 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-204ENST00000586417 APOFQ13790 326 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 VWA2Q5GFL6 755 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF770Q6IQ21 691 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-204ENST00000586417 FIGNL1Q6PIW4 674 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 PEX5LQ8IYB4 626 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 CLIP4Q8N3C7 705 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 PTPMT1Q8WUK0 201 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-204ENST00000586417 ULBP3Q9BZM4 244 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 RIBC2Q9H4K1 309 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 KCNE5Q9UJ90 142 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 SDK2Q58EX2 2172 aa18.94■□□□□ 0.62
ATG4D-204ENST00000586417 SOX30O94993 753 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 CCNB2O95067 398 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 KCNK2O95069 426 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 H1F0P07305 194 aaKnown RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 THBS1P07996 1170 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ANXA8P13928 327 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ELAVL4P26378 380 aaKnown RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 PLA2G5P39877 138 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 CLK3P49761 638 aaKnown RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 PGDP52209 483 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 RAB15P59190 212 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 IL1RL1Q01638 556 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 PIN1Q13526 163 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 GPR68Q15743 365 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 MAPK14Q16539 360 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 MINDY4Q4G0A6 757 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF691Q5VV52 312 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 LCN10Q6JVE6 187 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TTC33Q6PID6 262 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 NPSR1Q6W5P4 371 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF836Q6ZNA1 936 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 C8orf59Q8N0T1 100 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF786Q8N393 782 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 GALNT15Q8N3T1 639 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 GABARAPL3Q9BY60 117 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 OR10A5Q9H207 317 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TRIM45Q9H8W5 580 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 FOXJ2Q9P0K8 574 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 PCDHGA8Q9Y5G5 932 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TRIM64A6NGJ6 449 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 C17orf105B2RV13 164 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 FRS3O43559 492 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms