RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 COX4I1P13073 169 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF24P17028 368 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 LCN1P31025 176 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 MEOX1P50221 254 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 DSTNP60981 165 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 MXRA7P84157 204 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SNTA1Q13424 505 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 TOMM20Q15388 145 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 CYP51A1Q16850 503 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 TRMT5Q32P41 509 aaKnown RBP12.73□□□□□ -0.37
TRAF4-215ENST00000584944 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 COQ5Q5HYK3 327 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 PAGE3Q5JUK9 113 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SLC30A6Q6NXT4 461 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SULF2Q8IWU5 870 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 POU5F2Q8N7G0 328 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 OR52N2Q8NGI0 321 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SPPL2AQ8TCT8 520 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 MIPOL1Q8TD10 442 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 PAQR8Q8TEZ7 354 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 ZFP90Q8TF47 636 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SLC35A4Q96G79 324 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SCMH1Q96GD3 660 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 AURKBQ96GD4 344 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF597Q96LX8 424 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 OSBPL11Q9BXB4 747 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 HES7Q9BYE0 225 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 PAIP1Q9H074 479 aaKnown RBP12.73□□□□□ -0.37
TRAF4-215ENST00000584944 EFCAB1Q9HAE3 211 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 CALML5Q9NZT1 146 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 P2RX2Q9UBL9 471 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
TRAF4-215ENST00000584944 CHCHD2Q9Y6H1 151 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-215ENST00000584944 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.73□□□□□ -0.37
TRAF4-215ENST00000584944 AIM2O14862 343 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 SCO2O43819 266 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF354AO60765 605 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-215ENST00000584944 ICOSLGO75144 302 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 CYP4B1P13584 511 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 EVI2BP34910 448 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 GCKP35557 465 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 MNAT1P51948 309 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 ALDH6A1Q02252 535 aaKnown RBP12.72□□□□□ -0.37
TRAF4-215ENST00000584944 FADDQ13158 208 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 ELOAQ14241 798 aaKnown RBP12.72□□□□□ -0.37
TRAF4-215ENST00000584944 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAF4-215ENST00000584944 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 LRIF1Q5T3J3 769 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 RPUSD3Q6P087 351 aaKnown RBP12.72□□□□□ -0.37
TRAF4-215ENST00000584944 ATCAYQ86WG3 371 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 DPP10Q8N608 796 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 OR2M7Q8NG81 312 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 CGREF1Q99674 301 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 UBQLN4Q9NRR5 601 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 OLAHQ9NV23 265 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 PPP4R1LQ9P1A2 415 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 ABCG2Q9UNQ0 655 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 L3MBTL1Q9Y468 752 aa12.72□□□□□ -0.37
TRAF4-215ENST00000584944 UTP20O75691 2785 aaKnown RBP12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ANKRD33BA6NCL7 494 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ASPDHA6ND91 283 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 GTPBP1O00178 669 aaKnown RBP12.71□□□□□ -0.37
TRAF4-215ENST00000584944 TSPAN2O60636 221 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ETFAP13804 333 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ELAVL4P26378 380 aaKnown RBP12.71□□□□□ -0.37
TRAF4-215ENST00000584944 RFC3P40938 356 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 CASP3P42574 277 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 DNASE1L1P49184 302 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 NUDT2P50583 147 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 CRISP3P54108 245 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 CAPRIN1Q14444 709 aaKnown RBP12.71□□□□□ -0.37
TRAF4-215ENST00000584944 RGNQ15493 299 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 INPP5JQ15735 1006 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-215ENST00000584944 GPR68Q15743 365 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ARHGAP11BQ3KRB8 267 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 GCNT6Q5T4J0 391 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 LYPD8Q6UX82 237 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 OR1J4Q8NGS1 313 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 CPT1CQ8TCG5 803 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ROPN1LQ96C74 230 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 RCN3Q96D15 328 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.37
TRAF4-215ENST00000584944 ECSITQ9BQ95 431 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 CCDC106Q9BWC9 280 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 EXO5Q9H790 373 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 POLE3Q9NRF9 147 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 SLC6A13Q9NSD5 602 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 VAPAQ9P0L0 249 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 WDR45Q9Y484 360 aa12.71□□□□□ -0.37
TRAF4-215ENST00000584944 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.38
TRAF4-215ENST00000584944 SHANK1Q9Y566 2161 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 ESPL1Q14674 2120 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 C15orf38-AP3S2A0A0A6YYH1 394 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
TRAF4-215ENST00000584944 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms