RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 JADE3Q92613 823 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 COQ8BQ96D53 544 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 WDYHV1Q96HA8 205 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 YIPF4Q9BSR8 244 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 DSN1Q9H410 356 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 AKTIPQ9H8T0 292 aa18.57■□□□□ 0.56
SS18-224ENST00000584083 FAM120CQ9NX05 1096 aaKnown RBP18.57■□□□□ 0.56
SS18-224ENST00000584083 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 C17orf51A8MQB3 221 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 CFLARO15519 480 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 UTS2O95399 124 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 EPPINO95925 133 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 ALOX5P09917 674 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 ACP2P11117 423 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 DPP4P27487 766 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 MAP3K8P41279 467 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 PRIM2P49643 509 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 WNT3P56703 355 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 BST1Q10588 318 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 SMU1Q2TAY7 513 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 PGS1Q32NB8 556 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 SPDYE7PQ495Y7 208 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 ZCCHC12Q6PEW1 402 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 GDF7Q7Z4P5 450 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 GALNT10Q86SR1 603 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 MARCH3Q86UD3 253 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 LACC1Q8IV20 430 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 SLC16A11Q8NCK7 471 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 HOXB13Q92826 284 aaPredicted RBP18.56■□□□□ 0.56
SS18-224ENST00000584083 FAM120BQ96EK7 910 aaKnown RBP18.56■□□□□ 0.56
SS18-224ENST00000584083 GIMAP5Q96F15 307 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 CHMP6Q96FZ7 201 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 C16orf58Q96GQ5 468 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 TRIB1Q96RU8 372 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 SPOCK3Q9BQ16 436 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 TBL1XR1Q9BZK7 514 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 SIRT3Q9NTG7 399 aaPredicted RBP18.56■□□□□ 0.56
SS18-224ENST00000584083 PNPOQ9NVS9 261 aa18.56■□□□□ 0.56
SS18-224ENST00000584083 HSPB2A8KAH6 182 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 C6orf47O95873 294 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 IGKV1D-16P01601 117 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 CLDN8P56748 225 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 WDR4P57081 412 aaKnown RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 MAGOHP61326 146 aaKnown RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 SRYQ05066 204 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 RCAN2Q14206 197 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 HSPB2Q16082 182 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 DUSP5Q16690 384 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 GRAMD1BQ3KR37 738 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 AAGABQ6PD74 315 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 SEM1Q6ZVN7 128 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 LIX1LQ8IVB5 337 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 RIMKLAQ8IXN7 391 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 OR2M3Q8NG83 312 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 DUSP19Q8WTR2 217 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 OTUB1Q96FW1 271 aaPredicted RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 SFXN2Q96NB2 322 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 DUSP26Q9BV47 211 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 NUF2Q9BZD4 464 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 BHLHE41Q9C0J9 482 aaPredicted RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 ENKD1Q9H0I2 346 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 TMBIM4Q9HC24 238 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 ASIC5Q9NY37 505 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 NKIRAS1Q9NYS0 192 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 MED11Q9P086 117 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 HAO1Q9UJM8 370 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 RPH3AQ9Y2J0 694 aaPredicted RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 MRPS18CQ9Y3D5 142 aaKnown RBP18.55■□□□□ 0.56
SS18-224ENST00000584083 KIAA1549Q9HCM3 1950 aa18.55■□□□□ 0.56
SS18-224ENST00000584083 KDM4EB2RXH2 506 aaPredicted RBP18.54■□□□□ 0.56
SS18-224ENST00000584083 H0Y3Z8 333 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 ZIC3O60481 467 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 IL2RAP01589 272 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 HMGN2P05204 90 aaKnown RBP18.54■□□□□ 0.56
SS18-224ENST00000584083 CPN1P15169 458 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 DIO3P55073 304 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 DSCR4P56555 118 aaPredicted RBP18.54■□□□□ 0.56
SS18-224ENST00000584083 LASP1Q14847 261 aaKnown RBP18.54■□□□□ 0.56
SS18-224ENST00000584083 NSUN5P2Q63ZY6 315 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 FIGNL1Q6PIW4 674 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 COX18Q8N8Q8 333 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 FADS6Q8N9I5 356 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 TNIP2Q8NFZ5 429 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 DOCK7Q96N67 2140 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 RTN4RQ9BZR6 473 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 PTGES2Q9H7Z7 377 aa18.54■□□□□ 0.56
SS18-224ENST00000584083 NPDC1Q9NQX5 325 aaPredicted RBP18.54■□□□□ 0.56
SS18-224ENST00000584083 B4DXG7 233 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 KCNK2O95069 426 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 STARP49675 285 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 GFRA1P56159 465 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 C21orf58P58505 322 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 TFF3Q07654 80 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 C17orf67Q0P5P2 114 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 TP53BP2Q13625 1128 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 SLC25A35Q3KQZ1 300 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 OR56A1Q8NGH5 318 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 ZPLD1Q8TCW7 415 aa18.53■□□□□ 0.56
SS18-224ENST00000584083 TRIM8Q9BZR9 551 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms