RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 OLIG3Q7RTU3 272 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 DHFR2Q86XF0 187 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 TAGAPQ8N103 731 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 SLC34A3Q8N130 599 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 SLC15A4Q8N697 577 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 FIG4Q92562 907 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 TMBIM1Q969X1 311 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 THOC3Q96J01 351 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 LMF1Q96S06 567 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 TREX2Q9BQ50 279 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 G6PC3Q9BUM1 346 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 ZNF350Q9GZX5 532 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 SLC38A1Q9H2H9 487 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 MTHFD2LQ9H903 347 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 POLE3Q9NRF9 147 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 RYDENQ9NUL5 291 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 MAGEL2Q9UJ55 1249 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 MRTO4Q9UKD2 239 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 ANGPT4Q9Y264 503 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 NPFFR2Q9Y5X5 522 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 PIEZO2Q9H5I5 2752 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 MAST4O15021 2626 aa15.08■□□□□ 0
CDK5RAP3-228ENST00000583363 K7ENP7 123 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 M0QX08 132 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 ARPC2O15144 300 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 TSPAN2O60636 221 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 CIB2O75838 187 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 OR2J2O76002 312 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 NAGAP17050 411 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 ABCD3P28288 659 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 NRG3P56975 720 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 CRB2Q5IJ48 1285 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 RPS26P11Q5JNZ5 115 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 INO80CQ6PI98 192 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 LYPD8Q6UX82 237 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 FRRS1Q6ZNA5 592 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 SLC5A8Q8N695 610 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 CLEC1AQ8NC01 280 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 FAM13CQ8NE31 585 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 OR52E4Q8NGH9 312 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 BBS10Q8TAM1 723 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 BRIX1Q8TDN6 353 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 PMM1Q92871 262 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 ZG16BQ96DA0 208 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 OMA1Q96E52 524 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 LHPPQ9H008 270 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 YARS2Q9Y2Z4 477 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 WDR45Q9Y484 360 aa15.07■□□□□ 0
CDK5RAP3-228ENST00000583363 MAN1A2O60476 641 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 ITGA10O75578 1167 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 REM1O75628 298 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 ETS2P15036 469 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 AQP1P29972 269 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 LCN1P31025 176 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 PNLIPRP2P54317 469 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 PSMD4P55036 377 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 POLE2P56282 527 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 DEFB109BQ30KR1 87 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 C1orf146Q5VVC0 180 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 FCRLBQ6BAA4 426 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 LCN8Q6JVE9 175 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 CCDC81Q6ZN84 652 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 ZAR1Q86SH2 424 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 GALNT10Q86SR1 603 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 PATL1Q86TB9 770 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 SPPL2CQ8IUH8 684 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 PRR22Q8IZ63 422 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 ZNF619Q8N2I2 560 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 SLC22A8Q8TCC7 542 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 WDR60Q8WVS4 1066 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 DIO2Q92813 273 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 FAM162AQ96A26 154 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 ZNF354BQ96LW1 612 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 RASL10BQ96S79 203 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 ING2Q9H160 280 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 MKLN1Q9UL63 735 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 GPC6Q9Y625 555 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 MED13Q9UHV7 2174 aa15.06■□□□□ 0
CDK5RAP3-228ENST00000583363 DOCK10Q96BY6 2186 aa15.05■□□□□ 0
CDK5RAP3-228ENST00000583363 PDE9AO76083 593 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 MFN2O95140 757 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 STAMBPO95630 424 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 ATP6V1B2P21281 511 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 ATP6V1C1P21283 382 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 ITGA3P26006 1051 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 RFX3P48380 749 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 CRYBA2P53672 197 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 HPCAP84074 193 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 PLCXD2Q0VAA5 305 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 GPR68Q15743 365 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 MEP1AQ16819 746 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 B3GNTL1Q67FW5 361 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 CYP2R1Q6VVX0 501 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 GALNT16Q8N428 558 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 SIRT6Q8N6T7 355 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 EFHD2Q96C19 240 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 NSMCE2Q96MF7 247 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 ZNF607Q96SK3 696 aa15.05■□□□□ -0
CDK5RAP3-228ENST00000583363 ADOQ96SZ5 270 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms