RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 USH1CQ9Y6N9 552 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 DNAJC13O75165 2243 aa11.5□□□□□ -0.57
SMARCE1-218ENST00000582955 SPTAN1Q13813 2472 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 FLNBO75369 2602 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 RNF103-CHMP3A0A140T963 221 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 PRSS51A0A1B0GVH4 220 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 FIGNL2A6NMB9 653 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 CBR3O75828 277 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 KCNK2O95069 426 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 UTS2O95399 124 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 CLDN1O95832 211 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 IGKV1D-16P01601 117 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 HPNP05981 417 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 GP1BBP13224 206 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 IDO1P14902 403 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 SMSP52788 366 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 POU6F2P78424 691 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ADORA2A-AS1P86434 159 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 EIPR1Q53HC9 387 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 EMC4Q5J8M3 183 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 WIPI1Q5MNZ9 446 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 CDC73Q6P1J9 531 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ACAD11Q709F0 780 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 YRDCQ86U90 279 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 CLEC4FQ8N1N0 589 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 WDSUB1Q8N9V3 476 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 FAM83FQ8NEG4 500 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 OR4K17Q8NGC6 315 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ADAMTS15Q8TE58 950 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 RNF138Q8WVD3 245 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ITLN2Q8WWU7 325 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 CDS1Q92903 461 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 DTNBP1Q96EV8 351 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 TEX37Q96LM6 180 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ACTRT3Q9BYD9 372 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 TBL1XR1Q9BZK7 514 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 PIGUQ9H490 435 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 SDHAF3Q9NRP4 125 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 FAM120CQ9NX05 1096 aaKnown RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 ABCG2Q9UNQ0 655 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 SLC6A5Q9Y345 797 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 GPR45Q9Y5Y3 372 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 DOPEY1Q5JWR5 2465 aa11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 USP9YO00507 2555 aaPredicted RBP11.49□□□□□ -0.57
SMARCE1-218ENST00000582955 UQCRHLA0A096LP55 91 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 C17orf51A8MQB3 221 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 ZNF195O14628 629 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 ADAM10O14672 748 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 UBDO15205 165 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 POLR3GO15318 223 aaPredicted RBP11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 FADS1O60427 444 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 TCEA1P23193 301 aaKnown RBP11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 IL12AP29459 219 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 GCKP35557 465 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 DGKQP52824 942 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 GAS1P54826 345 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 PHC1P78364 1004 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 GSTA3Q16772 222 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 GRAMD1BQ3KR37 738 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 CCNJQ5T5M9 372 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 TMEM211Q6ICI0 200 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 EPGNQ6UW88 154 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 MARCH3Q86UD3 253 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 ZNF808Q8N4W9 903 aaPredicted RBP11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 PHF10Q8WUB8 498 aaKnown RBP11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 CKAP2Q8WWK9 683 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 SLC35G5Q96KT7 338 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 DMRTA2Q96SC8 542 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 STACQ99469 402 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 G6PC3Q9BUM1 346 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 BTBD2Q9BX70 525 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 DUSP22Q9NRW4 184 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 GPATCH2Q9NW75 528 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 FBXL2Q9UKC9 423 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 ICE1Q9Y2F5 2266 aa11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 SPTBN1Q01082 2364 aaKnown RBP11.48□□□□□ -0.57
SMARCE1-218ENST00000582955 SCN2BO60939 215 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 WDR1O75083 606 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 SLC22A3O75751 556 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 PGRP06401 933 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 HPGDP15428 266 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 ATP6V1C1P21283 382 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 MATN1P21941 496 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 ACVR2AP27037 513 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 SRD5A2P31213 254 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 RPS26P62854 115 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 CRYZQ08257 329 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 EXOSC6Q5RKV6 272 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 DCST2Q5T1A1 773 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 HIST2H2BCQ6DN03 193 aa11.47□□□□□ -0.57
SMARCE1-218ENST00000582955 XKRXQ6PP77 449 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms