RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SLC35A4Q96G79 324 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
SS18-222ENST00000582792 KCNK9Q9NPC2 374 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 ELOVL5Q9NYP7 299 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 ADAM21Q9UKJ8 722 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 GPR55Q9Y2T6 319 aaPredicted RBP12.25□□□□□ -0.45
SS18-222ENST00000582792 RTTNQ86VV8 2226 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 B4DXG7 233 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 ZIC3O60481 467 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 REM1O75628 298 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 SASH3O75995 380 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 SNUPNO95149 360 aaKnown RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 CNOT4O95628 575 aaKnown RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 ESRRBO95718 433 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 ENO1P06733 434 aaKnown RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 POU2F1P14859 743 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 PCSK2P16519 638 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 DPP4P27487 766 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 LOXP28300 417 aaPredicted RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 KIR2DL2P43627 348 aaPredicted RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 SERPINB4P48594 390 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 PTH2RP49190 550 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 CDH13P55290 713 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 B3GALT5-AS1P59052 145 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 IFT88Q13099 833 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 MPP2Q14168 576 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 LTB4RQ15722 352 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 TTC19Q6DKK2 380 aaPredicted RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 OR5M10Q6IEU7 315 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 GPRIN3Q6ZVF9 776 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 CHMP1BQ7LBR1 199 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 ZNF550Q7Z398 422 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 COMMD6Q7Z4G1 85 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 OR4F6Q8NGB9 312 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 RNF138Q8WVD3 245 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 IGFBPL1Q8WX77 278 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 TM4SF18Q96CE8 201 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 KLHL29Q96CT2 875 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 CNRIP1Q96F85 164 aaPredicted RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 BTBD9Q96Q07 612 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 ADOQ96SZ5 270 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 SLC39A3Q9BRY0 314 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 REPIN1Q9BWE0 567 aaKnown RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 GATA5Q9BWX5 397 aaPredicted RBP12.24□□□□□ -0.45
SS18-222ENST00000582792 HEY2Q9UBP5 337 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 PSME2Q9UL46 239 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 SNX6Q9UNH7 406 aa12.24□□□□□ -0.45
SS18-222ENST00000582792 TMEM120BA0PK00 339 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 SERTM1A2A2V5 107 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 C16orf97H3BN30 126 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 EMC8O43402 210 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 TSPAN2O60636 221 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 CGAP01215 116 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 CD8BP10966 210 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 PEPDP12955 493 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 TCEA1P23193 301 aaKnown RBP12.23□□□□□ -0.45
SS18-222ENST00000582792 GRK2P25098 689 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 GAS1P54826 345 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 DSCR4P56555 118 aaPredicted RBP12.23□□□□□ -0.45
SS18-222ENST00000582792 SIRPAP78324 504 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 MRPS35P82673 323 aaKnown RBP12.23□□□□□ -0.45
SS18-222ENST00000582792 EFR3AQ14156 821 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 TTMPQ5BVD1 217 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 FAM180BQ6P0A1 224 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 LETMD1Q6P1Q0 360 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 CCNYL1Q8N7R7 359 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 FIG4Q92562 907 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 ZNF845Q96IR2 970 aaPredicted RBP12.23□□□□□ -0.45
SS18-222ENST00000582792 ZNF681Q96N22 645 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 PIGQQ9BRB3 760 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 ZNF446Q9NWS9 450 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 NKIRAS1Q9NYS0 192 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 ZNF225Q9UK10 706 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 SLC12A4Q9UP95 1085 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 ZNF780BQ9Y6R6 833 aa12.23□□□□□ -0.45
SS18-222ENST00000582792 HEATR5AQ86XA9 2040 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 PPP6CO00743 305 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 BCAS2O75934 225 aaPredicted RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 KRT6AP02538 564 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 KRT6BP04259 564 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 CT45A8P0DMV1 189 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 CT45A9P0DMV2 189 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 HSD3B1P14060 373 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 PAX1P15863 534 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 HSD3B2P26439 372 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 IL12BP29460 328 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 KRT20P35900 424 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 KCNJ5P48544 419 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 KRT6CP48668 564 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 CLDN15P56746 228 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 CORO7P57737 925 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 EEFSECP57772 596 aaKnown RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 TRA2BP62995 288 aaKnown RBP12.22□□□□□ -0.45
SS18-222ENST00000582792 PSPHP78330 225 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 FGFBP1Q14512 234 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 CT45A2Q5DJT8 189 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 ZNF628Q5EBL2 1059 aa12.22□□□□□ -0.45
SS18-222ENST00000582792 HHATQ5VTY9 493 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms