RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KRT20P35900 424 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 OR1D4P47884 311 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 MAN2A2P49641 1150 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 HMGA2P52926 109 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 PDX1P52945 283 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 CRYBA2P53672 197 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 CDC42P60953 191 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 RPP38P78345 283 aaKnown RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 BTG2P78543 158 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 EIF3IQ13347 325 aaKnown RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 TRAM2Q15035 370 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 CLPPQ16740 277 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 SYT16Q17RD7 645 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ZSWIM7Q19AV6 140 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ISXQ2M1V0 245 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 C6orf141Q5SZD1 244 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 PHF19Q5T6S3 580 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 FHL5Q5TD97 284 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ZNF691Q5VV52 312 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 BROXQ5VW32 411 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 CDCP2Q5VXM1 449 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 HEPHL1Q6MZM0 1159 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 FAHD1Q6P587 224 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 DHRS4L2Q6PKH6 230 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ZNF730Q6ZMV8 503 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ZNF605Q86T29 641 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 VRK2Q86Y07 508 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 TMEM151BQ8IW70 566 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ZNF614Q8N883 585 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 AQP11Q8NBQ7 271 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 CHDHQ8NE62 594 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 OR7G1Q8NGA0 311 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 GPR32P1Q8NGA4 272 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 OR4D9Q8NGE8 314 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 OR1L3Q8NH93 324 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 PIK3R3Q92569 461 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 GTPBP3Q969Y2 492 aaKnown RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 CLIP3Q96DZ5 547 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 SLC41A2Q96JW4 573 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 PRRC1Q96M27 445 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 NUDT22Q9BRQ3 303 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 UCK2Q9BZX2 261 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 GRIP2Q9C0E4 1043 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 CCDC90BQ9GZT6 254 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 SLC38A1Q9H2H9 487 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 FOLH1BQ9HBA9 442 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 MKKSQ9NPJ1 570 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 DHCR7Q9UBM7 475 aaKnown RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 COPS7AQ9UBW8 275 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 ATXN7L1Q9ULK2 861 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 ZNF443Q9Y2A4 671 aaPredicted RBP8.64□□□□□ -1.03
SS18-220ENST00000582092 U3KQA8 63 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 EPG5Q9HCE0 2579 aa8.64□□□□□ -1.03
SS18-220ENST00000582092 APC2O95996 2303 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 A8MUA0 341 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 C17orf105B2RV13 164 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 H3BN98 237 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 MPZL2O60487 215 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 TPST2O60704 377 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 FAM20BO75063 409 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 ANGPTL1O95841 491 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 THBS1P07996 1170 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 MSL3P1P0C860 447 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 POU2F1P14859 743 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 HPGDP15428 266 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 AGXTP21549 392 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 TTKP33981 857 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 RORAP35398 523 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 GABREP78334 506 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 DUSP8Q13202 625 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 SQSTM1Q13501 440 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 PIN1Q13526 163 aaPredicted RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 DSG2Q14126 1118 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 MAPK11Q15759 364 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 DECR1Q16698 335 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 MEP1AQ16819 746 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 FLYWCH1Q4VC44 716 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 PERM1Q5SV97 790 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 RNF220Q5VTB9 566 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 C1orf189Q5VU69 101 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 FIGNL1Q6PIW4 674 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 OLIG3Q7RTU3 272 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 GPR141Q7Z602 305 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 HMGN2P46Q86SG4 172 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 CDK20Q8IZL9 346 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 BPIFB6Q8NFQ5 453 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 WDR36Q8NI36 951 aaKnown RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 METTL21AQ8WXB1 218 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 DAZLQ92904 295 aaKnown RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 FGF11Q92914 225 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 MCHR1Q99705 422 aa8.63□□□□□ -1.03
SS18-220ENST00000582092 BARD1Q99728 777 aaKnown RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 POLR2J2Q9GZM3 115 aaKnown RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 QRSL1Q9H0R6 528 aaKnown RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 POLR2J3Q9H1A7 115 aaKnown RBP8.63□□□□□ -1.03
SS18-220ENST00000582092 OR10A5Q9H207 317 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms