RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 GANABQ14697 944 aaKnown RBP9.55□□□□□ -0.88
RFFL-209ENST00000581265 ACKR1Q16570 336 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 DECR1Q16698 335 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 WHAMMP3Q1A5X7 153 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 PRSS53Q2L4Q9 553 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 GLYR1Q49A26 553 aaPredicted RBP9.55□□□□□ -0.88
RFFL-209ENST00000581265 Q5PR19 223 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 OR2L13Q8N349 312 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 DUSP19Q8WTR2 217 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 IFT81Q8WYA0 676 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 L3HYPDHQ96EM0 354 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 MARK4Q96L34 752 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 FAM111AQ96PZ2 611 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 MED18Q9BUE0 208 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 RTN4RQ9BZR6 473 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 OPN3Q9H1Y3 402 aaPredicted RBP9.55□□□□□ -0.88
RFFL-209ENST00000581265 FAM120CQ9NX05 1096 aaKnown RBP9.55□□□□□ -0.88
RFFL-209ENST00000581265 MED11Q9P086 117 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 SENP1Q9P0U3 644 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 GRID1Q9ULK0 1009 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 TIMM22Q9Y584 194 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFFL-209ENST00000581265 PCNX3Q9H6A9 2034 aa9.55□□□□□ -0.88
RFFL-209ENST00000581265 HIVEP2P31629 2446 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 IGLV3-32A0A0A0MS00 114 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 EXOC1LA0A1B0GW35 172 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 OR2M5A3KFT3 312 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 H7C1Q1 480 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 UPK1AO00322 258 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 SCO2O43819 266 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 IL33O95760 270 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 JUNP05412 331 aaKnown RBP9.54□□□□□ -0.88
RFFL-209ENST00000581265 POU2F1P14859 743 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 GCAP28676 217 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 CCKARP32238 428 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 CLK3P49761 638 aaKnown RBP9.54□□□□□ -0.88
RFFL-209ENST00000581265 NCBP2P52298 156 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFFL-209ENST00000581265 CLDN20P56880 219 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 BTKQ06187 659 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 ZNF763Q0D2J5 394 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 C17orf67Q0P5P2 114 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 GUSBP1Q15486 140 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 TMEM44Q2T9K0 475 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 GLE1Q53GS7 698 aaKnown RBP9.54□□□□□ -0.88
RFFL-209ENST00000581265 SPDYAQ5MJ70 313 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 SH2D4BQ5SQS7 431 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 RAET1LQ5VY80 246 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 FAM71E1Q6IPT2 247 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 C22orf34Q6ZV56 151 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 FAM214BQ7L5A3 538 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 ZNF610Q8N9Z0 462 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 NOA1Q8NC60 698 aaKnown RBP9.54□□□□□ -0.88
RFFL-209ENST00000581265 FAM76AQ8TAV0 307 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 FNDC9Q8TBE3 224 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 ELP4Q96EB1 424 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 C1GALT1C1Q96EU7 318 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 ZNF845Q96IR2 970 aaPredicted RBP9.54□□□□□ -0.88
RFFL-209ENST00000581265 COX4I2Q96KJ9 171 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 PIGQQ9BRB3 760 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 BDH2Q9BUT1 245 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 PINK1Q9BXM7 581 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 EBPLQ9BY08 206 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 FLRT3Q9NZU0 649 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 MRTO4Q9UKD2 239 aaKnown RBP9.54□□□□□ -0.88
RFFL-209ENST00000581265 ADAM21Q9UKJ8 722 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 AP4B1Q9Y6B7 739 aa9.54□□□□□ -0.88
RFFL-209ENST00000581265 DSCAMO60469 2012 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 TTC36A6NLP5 189 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 UBFD1O14562 309 aaKnown RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 URI1O94763 535 aaPredicted RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 GSTA1P08263 222 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 ABHD2P08910 425 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 IFI6P09912 130 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 IL11P20809 199 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 TBXA2RP21731 343 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 LOXP28300 417 aaPredicted RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 KCNJ5P48544 419 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 PSMD4P55036 377 aaKnown RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 RPS3AP61247 264 aaKnown RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 SIRPAP78324 504 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 PRR5P85299 388 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 ZNF155Q12901 538 aaPredicted RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 PON3Q15166 354 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 ZNHIT3Q15649 155 aaPredicted RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 TMEM107Q6UX40 140 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 C20orf204Q6ZNR8 217 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 TRIM46Q7Z4K8 759 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 MARCH3Q86UD3 253 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 CNPY4Q8N129 248 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 METTL25Q8N6Q8 603 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 OR5M1Q8NGP8 315 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 ACMSDQ8TDX5 336 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 CAVIN3Q969G5 261 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 PIK3IP1Q96FE7 263 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 AMDHD1Q96NU7 426 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 KCNA7Q96RP8 456 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 LMF2Q9BU23 707 aaKnown RBP9.53□□□□□ -0.88
RFFL-209ENST00000581265 GLIPR2Q9H4G4 154 aa9.53□□□□□ -0.88
RFFL-209ENST00000581265 GSTO2Q9H4Y5 243 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms