RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC7A6OSQ96CW6 309 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-203ENST00000580986 TMCO6Q96DC7 493 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 RMND5BQ96G75 393 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF583Q96ND8 569 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 COL21A1Q96P44 957 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 UTP23Q9BRU9 249 aaKnown RBP9.57□□□□□ -0.88
CCDC47-203ENST00000580986 YIPF4Q9BSR8 244 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 HOXD1Q9GZZ0 328 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 MMADHCQ9H3L0 296 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-203ENST00000580986 ALG2Q9H553 416 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 HPF1Q9NWY4 346 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 CMTM6Q9NX76 183 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 CNIH4Q9P003 139 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 SUCOQ9UBS9 1254 aaKnown RBP9.57□□□□□ -0.88
CCDC47-203ENST00000580986 PRDM4Q9UKN5 801 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 ATMQ13315 3056 aa9.57□□□□□ -0.88
CCDC47-203ENST00000580986 DSPP15924 2871 aaKnown RBP9.57□□□□□ -0.88
CCDC47-203ENST00000580986 TNRC6AQ8NDV7 1962 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 A0A0G2JPF8 293 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 A0A1W2PQD3 144 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 GXYLT2A0PJZ3 443 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 PRAMEF27A3QJZ7 478 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 A6NL46 340 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 HNRNPCL2B2RXH8 293 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 HNRNPCL3B7ZW38 293 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 HS6ST1O60243 411 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 MAN1A2O60476 641 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 NME6O75414 186 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 NEURL1O76050 574 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 OR6B1O95007 311 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 WDPCPO95876 746 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 C1QCP02747 245 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 HNRNPCL4P0DMR1 293 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 NR2F1P10589 423 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ENDOUP21128 410 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ATP6V1C1P21283 382 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 TBXA2RP21731 343 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 RPS4Y1P22090 263 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 HTR1EP28566 365 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ADH7P40394 386 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 TNFSF10P50591 281 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 PCBP3P57721 371 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 HPCAP84074 193 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 MXRA7P84157 204 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ELOAQ14241 798 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 SELPLGQ14242 412 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 MAPK11Q15759 364 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF141Q15928 474 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 NNATQ16517 81 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 CYP51A1Q16850 503 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ZSWIM7Q19AV6 140 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 VMACQ2NL98 169 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 LINC00303Q3SY05 128 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 LACTB2Q53H82 288 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 INTS11Q5TA45 600 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 FCRLBQ6BAA4 426 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 REEP3Q6NUK4 255 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 FRRS1Q6ZNA5 592 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 CCDC121Q6ZUS5 278 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 WDR53Q7Z5U6 358 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 PTOV1Q86YD1 416 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 DEFB107AQ8IZN7 70 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 CYP4Z2PQ8N1L4 340 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF619Q8N2I2 560 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 C10orf111Q8N326 155 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 AMER2Q8N7J2 671 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF527Q8NB42 609 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 MDS2Q8NDY4 140 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 OR2T12Q8NG77 320 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 OR4N2Q8NGD1 307 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 OR10A6Q8NH74 314 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 BBS10Q8TAM1 723 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 FBXO30Q8TB52 745 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 RAB8BQ92930 207 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 SCMH1Q96GD3 660 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ABHD17AQ96GS6 310 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 FRMD6Q96NE9 622 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 BTBD10Q9BSF8 475 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 SLC38A1Q9H2H9 487 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 MTHFD2LQ9H903 347 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 LIN28AQ9H9Z2 209 aaKnown RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 UBQLN4Q9NRR5 601 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 LRFN1Q9P244 771 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 CD300AQ9UGN4 299 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 WDR45Q9Y484 360 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 CHCHD2Q9Y6H1 151 aaPredicted RBP9.56□□□□□ -0.88
CCDC47-203ENST00000580986 KCNE3Q9Y6H6 103 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 CACNA1GO43497 2377 aa9.56□□□□□ -0.88
CCDC47-203ENST00000580986 ITPR1Q14643 2758 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 TRAV17A0A0B4J275 112 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ELOVL7A1L3X0 281 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ALG1L2C9J202 215 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 DPM1O60762 260 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 UGT2B11O75310 529 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 REM1O75628 298 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 PDE9AO76083 593 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 SNX4O95219 450 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 PGM3O95394 542 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 H6PDO95479 791 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 IGKV1D-16P01601 117 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms