RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 SENP5Q96HI0 755 aaPredicted RBP9.75□□□□□ -0.85
SS18-217ENST00000580958 DHRS1Q96LJ7 313 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 NUDT9Q9BW91 350 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ANKRD60Q9BZ19 345 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 OR8D2Q9GZM6 311 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 SAP130Q9H0E3 1048 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 POLE3Q9NRF9 147 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 KLHL28Q9NXS3 571 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 A4GNTQ9UNA3 340 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 ZNF232Q9UNY5 417 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 IFT52Q9Y366 437 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 PCDHGA8Q9Y5G5 932 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 CLCA3PQ9Y6N3 262 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 MPDZO75970 2070 aa9.75□□□□□ -0.85
SS18-217ENST00000580958 MYO15AQ9UKN7 3530 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 TRBV4-1A0A0J9YWV2 114 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 AGAP5A6NIR3 686 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CLDN24A6NM45 220 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 C4orf47A7E2U8 309 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PRKNO60260 465 aaPredicted RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 BRINP1O60477 761 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CBFA2T3O75081 653 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CPNE3O75131 537 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 CNOT3O75175 753 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 CCNB2O95067 398 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 IGKV1D-16P01601 117 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 H1F0P07305 194 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 THBS1P07996 1170 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CT45A8P0DMV1 189 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CT45A9P0DMV2 189 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 IL7RP16871 459 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 ELAVL4P26378 380 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 CCKBRP32239 447 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PIGAP37287 484 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 HMGA2P52926 109 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 SLC37A1P57057 533 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 RGS8P57771 180 aaPredicted RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 EEF1A1P68104 462 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 EPS8Q12929 822 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 KCNAB2Q13303 367 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PIN1Q13526 163 aaPredicted RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 MICAQ29983 383 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 FLYWCH1Q4VC44 716 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 LIN52Q52LA3 116 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CT45A2Q5DJT8 189 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 FGD3Q5JSP0 725 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 KRT80Q6KB66 452 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 USP51Q70EK9 711 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 OVCH1Q7RTY7 1134 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 TSPYL5Q86VY4 417 aaPredicted RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 OFCC1Q8IZS5 231 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 SLC5A8Q8N695 610 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PIK3C3Q8NEB9 887 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 C7orf57Q8NEG2 295 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 ZNF555Q8NEP9 628 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PRSS33Q8NF86 280 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 OR9Q2Q8NGE9 314 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PHF10Q8WUB8 498 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 DAZLQ92904 295 aaKnown RBP9.74□□□□□ -0.85
SS18-217ENST00000580958 ART5Q96L15 291 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PRRC1Q96M27 445 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 SLC46A1Q96NT5 459 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 ALPK1Q96QP1 1244 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 RIBC2Q9H4K1 309 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 Q9N2J8 555 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PARD6AQ9NPB6 346 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 FBXO8Q9NRD0 319 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CTPS2Q9NRF8 586 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 KRT84Q9NSB2 600 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 SEMA4GQ9NTN9 838 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 C14orf105Q9NVL8 296 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 FAM118AQ9NWS6 357 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 SLC39A1Q9NY26 324 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 KCNE5Q9UJ90 142 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 C3orf18Q9UK00 162 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 ACAD8Q9UKU7 415 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 CBLCQ9ULV8 474 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 NTNG1Q9Y2I2 539 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 OR10H1Q9Y4A9 318 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 WDFY4Q6ZS81 3184 aa9.74□□□□□ -0.85
SS18-217ENST00000580958 PCNX3Q9H6A9 2034 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 FRYLO94915 3013 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 SDK2Q58EX2 2172 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 IGHV3-20A0A0C4DH32 117 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 VSTM2BA6NLU5 285 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 CPSF4LA6NMK7 179 aaKnown RBP9.73□□□□□ -0.85
SS18-217ENST00000580958 B4E171 279 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 MEN1O00255 615 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 TPST2O60704 377 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 ALOX12BO75342 701 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 RFPL3O75679 317 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 UGT2B17O75795 530 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 SEC24DO94855 1032 aaPredicted RBP9.73□□□□□ -0.85
SS18-217ENST00000580958 IGKV3-11P04433 115 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 GUSBP08236 651 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 ITGAMP11215 1152 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 AGXTP21549 392 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 CBLP22681 906 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 TSPAN7P41732 249 aa9.73□□□□□ -0.85
SS18-217ENST00000580958 EMP2P54851 167 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms