RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PRKAG1P54619 331 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 PDE7AQ13946 482 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 FLYWCH1Q4VC44 716 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 ZCCHC23Q6ZST2 131 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 EXOC3L1Q86VI1 746 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 AGR3Q8TD06 166 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 TWIST2Q8WVJ9 160 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 PIK3R3Q92569 461 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 ZNF764Q96H86 408 aaPredicted RBP19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 FAM120CQ9NX05 1096 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 CLCF1Q9UBD9 225 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 GIMAP2Q9UG22 337 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 MRTO4Q9UKD2 239 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 ABCG2Q9UNQ0 655 aa19.27■□□□□ 0.68
CSNK1D-215ENST00000580784 FAM221AA4D161 298 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 PIP5K1BO14986 540 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 UTS2O95399 124 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 BCKDHAP12694 445 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 CREB1P16220 341 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 HK1P19367 917 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 MANFP55145 182 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 SPNS3Q6ZMD2 512 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 GCNT2Q8N0V5 402 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 GPR151Q8TDV0 419 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 AENQ8WTP8 325 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 FAM222BQ8WU58 562 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 ZBED6CLQ96FA7 236 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 ROPN1BQ9BZX4 212 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 ROPN1Q9HAT0 212 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 C3orf14Q9HBI5 128 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 EML4Q9HC35 981 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 RASSF1Q9NS23 344 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 TMED5Q9Y3A6 229 aa19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 MAP1AP78559 2803 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 NUP214P35658 2090 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-215ENST00000580784 ABCA4P78363 2273 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 TTC36A6NLP5 189 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 TGM6O95932 706 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 EFNA1P20827 205 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 ARRB2P32121 409 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 MAP3K8P41279 467 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 FRKP42685 505 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 CLK3P49761 638 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 PSMD4P55036 377 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 BCL2A1Q16548 175 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 APOOLQ6UXV4 268 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 GALNT10Q86SR1 603 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 KIF18BQ86Y91 864 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 UBQLNLQ8IYU4 475 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 NUP43Q8NFH3 380 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 OR5M1Q8NGP8 315 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 CEP70Q8NHQ1 597 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 ZFP28Q8NHY6 868 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 LINC01560Q8TB33 94 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 HOXB13Q92826 284 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 RMND5BQ96G75 393 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 ZFP3Q96NJ6 502 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 CLEC4MQ9H2X3 399 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 LIME1Q9H400 295 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 ZNF337Q9Y3M9 751 aa19.25■□□□□ 0.67
CSNK1D-215ENST00000580784 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 TUBAL3A6NHL2 446 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 A6NNC1 897 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 NKX2-2O95096 273 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 KCNH1O95259 989 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 PEPDP12955 493 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 ASMTP46597 345 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 CLDN15P56746 228 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 GRAMD1BQ3KR37 738 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 RAET1LQ5VY80 246 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 SZRD1Q7Z422 152 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 LUZP2Q86TE4 346 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 GRAMD2AQ8IUY3 354 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 FBXO30Q8TB52 745 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 SLC9A6Q92581 669 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 GIMAP5Q96F15 307 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 SFXN3Q9BWM7 321 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 TBL1XR1Q9BZK7 514 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 PTGES2Q9H7Z7 377 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 ACSS1Q9NUB1 689 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 NTMQ9P121 344 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 ITPR3Q14573 2671 aa19.24■□□□□ 0.67
CSNK1D-215ENST00000580784 H0YC42 278 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 HCRTR2O43614 444 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 GMFGO60234 142 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 PEX11AO75192 247 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 SLU7O95391 586 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 ANGPTL1O95841 491 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 ACP2P11117 423 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 ART1P52961 327 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 SUCLG1P53597 346 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 IST1P53990 364 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 TPD52P55327 224 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 PRR5P85299 388 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 C17orf67Q0P5P2 114 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 DAZAP2Q15038 168 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 VPS26BQ4G0F5 336 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 EMBQ6PCB8 327 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 CHMP1BQ7LBR1 199 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 HOMEZQ8IX15 550 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms