RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 E9PLN8 166 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 GMFGO60234 142 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 UTS2O95399 124 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 UFM1P61960 85 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 ADORA2A-AS1P86434 159 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 DPY19L1Q2PZI1 675 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 CCNJQ5T5M9 372 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 HIST2H2BCQ6DN03 193 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 ZCCHC12Q6PEW1 402 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 BHLHB9Q6PI77 547 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 ACAD11Q709F0 780 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 CAMKMTQ7Z624 323 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 PLCZ1Q86YW0 608 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 FAM83FQ8NEG4 500 aaPredicted RBP17.78■□□□□ 0.44
SS18-209ENST00000578595 CDS1Q92903 461 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 SLC35G5Q96KT7 338 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 C7orf26Q96N11 449 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 VKORC1Q9BQB6 163 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 ACTRT3Q9BYD9 372 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 ACKR4Q9NPB9 350 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 SDHAF3Q9NRP4 125 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 NTMQ9P121 344 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 ABCG2Q9UNQ0 655 aa17.78■□□□□ 0.44
SS18-209ENST00000578595 A0A1B0GVC2 190 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 RNASET2O00584 256 aaKnown RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 POLR3GO15318 223 aaPredicted RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 CBR3O75828 277 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 CLDN1O95832 211 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 HPGDP15428 266 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 ENDOUP21128 410 aaKnown RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 ATP6V1C1P21283 382 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 RPS26P62854 115 aaKnown RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 GRAMD1BQ3KR37 738 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 TMEM211Q6ICI0 200 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 MAVSQ7Z434 540 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 CLEC4FQ8N1N0 589 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 ZNF808Q8N4W9 903 aaPredicted RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 OR8J2Q8NGG1 315 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 ITLN2Q8WWU7 325 aaPredicted RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 TESCQ96BS2 214 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 UBQLN3Q9H347 655 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 FAM120CQ9NX05 1096 aaKnown RBP17.77■□□□□ 0.44
SS18-209ENST00000578595 COQ3Q9NZJ6 369 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 CAMK2AQ9UQM7 478 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 HRH3Q9Y5N1 445 aa17.77■□□□□ 0.44
SS18-209ENST00000578595 C17orf51A8MQB3 221 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 PRSS44E7EML9 344 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 KCNK2O95069 426 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 IGKV1D-16P01601 117 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 HPNP05981 417 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 IDO1P14902 403 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 ACVR2AP27037 513 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 DGKQP52824 942 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 CDC73Q6P1J9 531 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 MARCH3Q86UD3 253 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 RPRMLQ8N4K4 120 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 WDSUB1Q8N9V3 476 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 GATSQ8NAP1 163 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 OR10Q1Q8NGQ4 319 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 PSMA8Q8TAA3 256 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 ACTRT2Q8TDY3 377 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 SDCCAG3Q96C92 435 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 OR52B2Q96RD2 323 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 FBXL2Q9UKC9 423 aa17.76■□□□□ 0.43
SS18-209ENST00000578595 UQCRHLA0A096LP55 91 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 PRSS51A0A1B0GVH4 220 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 ANKRD28O15084 1053 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 UBDO15205 165 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 COL8A1P27658 744 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 CHI3L1P36222 383 aaPredicted RBP17.75■□□□□ 0.43
SS18-209ENST00000578595 CASP9P55211 416 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 WNT3P56703 355 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 STX1BP61266 288 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 EMC4Q5J8M3 183 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 IFNEQ86WN2 208 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 OR5D16Q8NGK9 328 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 PHF10Q8WUB8 498 aaKnown RBP17.75■□□□□ 0.43
SS18-209ENST00000578595 TEX37Q96LM6 180 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 OR7D2Q96RA2 312 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 OR52E6Q96RD3 313 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 DMRTA2Q96SC8 542 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 STACQ99469 402 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 G6PC3Q9BUM1 346 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 BTBD2Q9BX70 525 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 DSN1Q9H410 356 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 PIGUQ9H490 435 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 DUSP22Q9NRW4 184 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 GIN1Q9NXP7 522 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 TAS2R10Q9NYW0 307 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 MED11Q9P086 117 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 RPH3AQ9Y2J0 694 aaPredicted RBP17.75■□□□□ 0.43
SS18-209ENST00000578595 PCDHGB3Q9Y5G1 929 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 GPR45Q9Y5Y3 372 aa17.75■□□□□ 0.43
SS18-209ENST00000578595 DOCK7Q96N67 2140 aa17.74■□□□□ 0.43
SS18-209ENST00000578595 WDR1O75083 606 aa17.74■□□□□ 0.43
SS18-209ENST00000578595 ANGPTL1O95841 491 aa17.74■□□□□ 0.43
SS18-209ENST00000578595 MATN1P21941 496 aa17.74■□□□□ 0.43
SS18-209ENST00000578595 DPP4P27487 766 aa17.74■□□□□ 0.43
SS18-209ENST00000578595 MAP3K8P41279 467 aa17.74■□□□□ 0.43
SS18-209ENST00000578595 PMPCAQ10713 525 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms