RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 DOLPP1Q86YN1 238 aa20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 GLB1L3Q8NCI6 653 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 SLC6A15Q9H2J7 730 aa20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 DUSP22Q9NRW4 184 aa20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 GIN1Q9NXP7 522 aa20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 FLRT3Q9NZU0 649 aa20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 FAF1Q9UNN5 650 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-206ENST00000577990 FREM3P0C091 2139 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 RNF103-CHMP3A0A140T963 221 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 NPIPA2E9PIF3 369 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 NPIPA3F8WFD2 350 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 POLR3GO15318 223 aaPredicted RBP20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 FADS1O60427 444 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 TRAPPC6AO75865 159 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 CPSF4O95639 269 aaKnown RBP20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 HPNP05981 417 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 IDH3AP50213 366 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 DGKQP52824 942 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 GAS1P54826 345 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 AQP5P55064 265 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 HSP90B2PQ58FF3 399 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 WDSUB1Q8N9V3 476 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 FAM110BQ8TC76 370 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 BTBD2Q9BX70 525 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 PIGUQ9H490 435 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 SERHLQ9NQF3 203 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 SDR39U1Q9NRG7 319 aaPredicted RBP20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 ZIM2Q9NZV7 527 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 BTNL2Q9UIR0 455 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 HRH3Q9Y5N1 445 aa20.24■□□□□ 0.83
SMARCD2-206ENST00000577990 SCO2O43819 266 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 SLC22A3O75751 556 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 KCNK2O95069 426 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 UTS2O95399 124 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 PGRP06401 933 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 ESRRAP11474 423 aaPredicted RBP20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 ENDOUP21128 410 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 TRPC1P48995 793 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 POU6F2P78424 691 aaPredicted RBP20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 TOMM20Q15388 145 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 MTFR2Q6P444 385 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 FIGNL1Q6PIW4 674 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 PLCZ1Q86YW0 608 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 EID3Q8N140 333 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 NEIL3Q8TAT5 605 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 ADAMTS15Q8TE58 950 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 CDS1Q92903 461 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 CCDC115Q96NT0 180 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 PHF12Q96QT6 1004 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 EBF4Q9BQW3 602 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 CCDC28BQ9BUN5 200 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 SPRR3Q9UBC9 169 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 MEMO1Q9Y316 297 aa20.23■□□□□ 0.83
SMARCD2-206ENST00000577990 BCKDKO14874 412 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 ZG16O60844 167 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 CBR3O75828 277 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 SOX30O94993 753 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 UQCRC2P22695 453 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 CLK3P49761 638 aaKnown RBP20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 GRAMD1BQ3KR37 738 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 C6orf120Q7Z4R8 191 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 GALNT10Q86SR1 603 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 CLEC4FQ8N1N0 589 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 MIER2Q8N344 545 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 SARAFQ96BY9 339 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 CCDC120Q96HB5 630 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 SLC35G5Q96KT7 338 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 OR52E6Q96RD3 313 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 MED4Q9NPJ6 270 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 PPP4R1LQ9P1A2 415 aa20.22■□□□□ 0.83
SMARCD2-206ENST00000577990 LRBAP50851 2863 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 ADAM10O14672 748 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 EDF1O60869 148 aaKnown RBP20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 IL6P05231 212 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 LCN1P31025 176 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 DCTP40126 519 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 LRRC74AQ0VAA2 488 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 CCNJQ5T5M9 372 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 C3P1Q6ZMU1 363 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 FAM83FQ8NEG4 500 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 GOT1L1Q8NHS2 421 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 DTNBP1Q96EV8 351 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 OR7D2Q96RA2 312 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 G6PC3Q9BUM1 346 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 TBL1XR1Q9BZK7 514 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 TP63Q9H3D4 680 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 SDHAF3Q9NRP4 125 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 TNFRSF10DQ9UBN6 386 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 ACAD8Q9UKU7 415 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 PCDHGB3Q9Y5G1 929 aa20.21■□□□□ 0.83
SMARCD2-206ENST00000577990 E9PLN8 166 aa20.2■□□□□ 0.82
SMARCD2-206ENST00000577990 ATP8B1O43520 1251 aa20.2■□□□□ 0.82
SMARCD2-206ENST00000577990 NGFRP08138 427 aa20.2■□□□□ 0.82
SMARCD2-206ENST00000577990 MATN1P21941 496 aa20.2■□□□□ 0.82
SMARCD2-206ENST00000577990 STX1BP61266 288 aa20.2■□□□□ 0.82
SMARCD2-206ENST00000577990 RPS26P62854 115 aaKnown RBP20.2■□□□□ 0.82
SMARCD2-206ENST00000577990 STX5Q13190 355 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms