RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 DUSP7Q16829 419 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 TBC1D25Q3MII6 688 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 HLA-DQA1Q5Y7H0 255 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 LCN10Q6JVE6 187 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 HMBOX1Q6NT76 420 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 NPSR1Q6W5P4 371 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 HSDL2Q6YN16 418 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 VTCN1Q7Z7D3 282 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 CYP4Z1Q86W10 505 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 HIPK1Q86Z02 1210 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SLC15A4Q8N697 577 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ZSCAN1Q8NBB4 408 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SIMC1Q8NDZ2 872 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 OR52P1PQ8NH57 321 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 NRG4Q8WWG1 115 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 EME1Q96AY2 570 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF300Q96RE9 604 aaPredicted RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 EPYCQ99645 322 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 PSD2Q9BQI7 771 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 NUDT9Q9BW91 350 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ITPAQ9BY32 194 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 WWTR1Q9GZV5 400 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 GABARAPL1Q9H0R8 117 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ANKRD19PQ9H560 264 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SOX17Q9H6I2 414 aaPredicted RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 NDUFAF4Q9P032 175 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 DKK4Q9UBT3 224 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 CFAP54Q96N23 3096 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 IGHV1-45A0A0A0MS14 117 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 OR2W5A6NFC9 320 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 HRKO00198 91 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 LIPCP11150 499 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 FPR1P21462 350 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 PEX2P28328 305 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 DNAJA1P31689 397 aaKnown RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 PNLIPRP2P54317 469 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ATP12AP54707 1039 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SESN3P58005 492 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SLC26A5P58743 744 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 VLDLRP98155 873 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF311Q5JNZ3 666 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 RPS26P11Q5JNZ5 115 aaPredicted RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 PLAG1Q6DJT9 500 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SHQ1Q6PI26 577 aaKnown RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 LANCL3Q6ZV70 420 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 TIPARPQ7Z3E1 657 aaKnown RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF605Q86T29 641 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 PACS2Q86VP3 889 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 DTX1Q86Y01 620 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ZDHHC13Q8IUH4 622 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 C9orf40Q8IXQ3 194 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SLC34A3Q8N130 599 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 LINC00471Q8N535 108 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF527Q8NB42 609 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 GPR32P1Q8NGA4 272 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 OR5K1Q8NHB7 308 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 M1APQ8TC57 530 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 DIO2Q92813 273 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SDCCAG3Q96C92 435 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 TPD52L3Q96J77 140 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 DHRS1Q96LJ7 313 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 IMMP1LQ96LU5 166 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF184Q99676 751 aaPredicted RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 PIP5K1AQ99755 562 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ARHGDIGQ99819 225 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 NTN4Q9HB63 628 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 MMP25Q9NPA2 562 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SLC13A4Q9UKG4 626 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 TCFL5Q9UL49 500 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 FARSAQ9Y285 508 aaKnown RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF443Q9Y2A4 671 aaPredicted RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 PTRH2Q9Y3E5 179 aaKnown RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 FAM32AQ9Y421 112 aaKnown RBP11.51□□□□□ -0.57
TSEN54-204ENST00000577197 OR10H1Q9Y4A9 318 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 LRRC42Q9Y546 428 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
TSEN54-204ENST00000577197 SDK2Q58EX2 2172 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 A0A1W2PQD3 144 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 CDHR4A6H8M9 788 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 FCMRO60667 390 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 ZFAND5O76080 213 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 RASAL1O95294 804 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 ZIC2O95409 532 aaPredicted RBP11.5□□□□□ -0.57
TSEN54-204ENST00000577197 OPN1SWP03999 348 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 THRBP10828 461 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 IL7RP16871 459 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF26P17031 533 aaPredicted RBP11.5□□□□□ -0.57
TSEN54-204ENST00000577197 IFNA8P32881 189 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 TMED10P49755 219 aaKnown RBP11.5□□□□□ -0.57
TSEN54-204ENST00000577197 NRG3P56975 720 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 EEF1A1P68104 462 aaKnown RBP11.5□□□□□ -0.57
TSEN54-204ENST00000577197 RNF4P78317 190 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 EPS8Q12929 822 aa11.5□□□□□ -0.57
TSEN54-204ENST00000577197 PCOLCEQ15113 449 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms