RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 UNC5DQ6UXZ4 953 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC9B2Q86UD5 537 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 LMF1Q96S06 567 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 OR8D2Q9GZM6 311 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 BACE2Q9Y5Z0 518 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 TMEM221A6NGB7 291 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 GABRPO00591 440 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SEC23BQ15437 767 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 BAK1Q16611 211 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 NXNL2Q5VZ03 156 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SLCO4C1Q6ZQN7 724 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 INO80EQ8NBZ0 244 aaPredicted RBP16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SDR9C7Q8NEX9 313 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SLIRPQ9GZT3 109 aaKnown RBP16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 GSKIPQ9P0R6 139 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 LAMP5Q9UJQ1 280 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 ARPC1BO15143 372 aaKnown RBP16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SNRPBP14678 240 aaKnown RBP16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 ZNF385BQ569K4 471 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC16A12Q6ZSM3 486 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 NRROSQ86YC3 692 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 OR5W2Q8NH69 310 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SNX18Q96RF0 628 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 ACER3Q9NUN7 267 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC22A31A6NKX4 558 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 H7C0S8 307 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 EIF3FO00303 357 aaPredicted RBP16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 IL1AP01583 271 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 SCG5P05408 212 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 FURINP09958 794 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 CR2P20023 1033 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 KCNJ10P78508 379 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 C1orf61Q13536 156 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 PRRT3Q5FWE3 981 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 LRIF1Q5T3J3 769 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 PARS2Q7L3T8 475 aaKnown RBP16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 GPR135Q8IZ08 494 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 WFIKKN2Q8TEU8 576 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 CASD1Q96PB1 797 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 ABCG4Q9H172 646 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 LIPT1Q9Y234 373 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 PCDHGB2Q9Y5G2 931 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 CACNG2Q9Y698 323 aa16.85■□□□□ 0.29
ATPAF1-214ENST00000576409 C1orf226A1L170 272 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 RFPL3O75679 317 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 RENP00797 406 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 TFP02787 698 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 APEHP13798 732 aaKnown RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 DEFB110Q30KQ9 67 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 CDKL4Q5MAI5 379 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 KLHL24Q6TFL4 600 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 PTOV1Q86YD1 416 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 DNAJA4Q8WW22 397 aaPredicted RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 OSGIN1Q9UJX0 560 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 NOX1Q9Y5S8 564 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 GVINP1Q7Z2Y8 2422 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 DOCK5Q9H7D0 1870 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 PTPRZ1P23471 2315 aaPredicted RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 AKR7A2O43488 359 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 CSTAP01040 98 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 PROS1P07225 676 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 ARSBP15848 533 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 CDK10Q15131 360 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 SF3A2Q15428 464 aaKnown RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 ACOT4Q8N9L9 421 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 OR2L5Q8NG80 312 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 OR7G1Q8NGA0 311 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 SETD7Q8WTS6 366 aaKnown RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 TM9SF4Q92544 642 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 C4orf36Q96KX1 117 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 SEC61A2Q9H9S3 476 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 RTTNQ86VV8 2226 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 B4DGG1 531 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 ZNF670-ZNF695F2Z2N8 137 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 SOCS6O14544 535 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 HRGP04196 525 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 PTPN6P29350 595 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 POU6F2P78424 691 aaPredicted RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 CAMKVQ8NCB2 501 aa16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 RBFOX1Q9NWB1 397 aaKnown RBP16.84■□□□□ 0.29
ATPAF1-214ENST00000576409 F5H0A9 414 aaPredicted RBP16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 CREBL2O60519 120 aaPredicted RBP16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 RP2O75695 350 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 TAS2R43P59537 309 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 FAPQ12884 760 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 ELAVL3Q14576 367 aaKnown RBP16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 AMZ1Q400G9 498 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 ALG10BQ5I7T1 473 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 C10orf111Q8N326 155 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 OR2A12Q8NGT7 310 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 FATE1Q969F0 183 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 RAB11FIP5Q9BXF6 653 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 SAV1Q9H4B6 383 aaPredicted RBP16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 SLC28A3Q9HAS3 691 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 MYNNQ9NPC7 610 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 RREB1Q92766 1687 aa16.83■□□□□ 0.29
ATPAF1-214ENST00000576409 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms