RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ATP1B1P05026 303 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 PABPC4LP0CB38 370 aaKnown RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 DHRS4L1P0CG22 281 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 CPMP14384 443 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 PORP16435 677 aaPredicted RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 ZNF23P17027 643 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 DRD5P21918 477 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 GABRB3P28472 473 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 EVI2BP34910 448 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 GGT5P36269 586 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 PIK3CBP42338 1070 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 PPICP45877 212 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 SLC6A8P48029 635 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 LIMS1P48059 325 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 FNTAP49354 379 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 FABP6P51161 128 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 XKP51811 444 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 PGGT1BP53609 377 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 ITGADQ13349 1161 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 P2RY6Q15077 328 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 TRIP13Q15645 432 aaPredicted RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 TSC22D1Q15714 1073 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 CARTPTQ16568 116 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 GLYR1Q49A26 553 aaPredicted RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 CDKL4Q5MAI5 379 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 SPANXN3Q5MJ09 141 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 TCHHL1Q5QJ38 904 aaPredicted RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 PDSS1Q5T2R2 415 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 ANKRD22Q5VYY1 191 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 HIST2H2BDQ6DRA6 164 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 SULT1C3Q6IMI6 304 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 MRM1Q6IN84 353 aaKnown RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 GRHL2Q6ISB3 625 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 ZNF544Q6NX49 715 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 WDR93Q6P2C0 686 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 C16orf87Q6PH81 154 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 SLC22A25Q6T423 547 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 SHISA2Q6UWI4 295 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 UGT2A3Q6UWM9 527 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 TFAP2EQ6VUC0 442 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 LARP4Q71RC2 724 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMG6-219ENST00000575663 BHLHA15Q7RTS1 189 aaPredicted RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 LRRC70Q7Z2Q7 622 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 CCDC91Q7Z6B0 441 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 TDRPQ86YL5 185 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 MYLK4Q86YV6 388 aaPredicted RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 WDR75Q8IWA0 830 aaKnown RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 IQCF2Q8IXL9 164 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 GABRG1Q8N1C3 465 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 FADS6Q8N9I5 356 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 MCUQ8NE86 351 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 OR7G3Q8NG95 312 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 OR52R1Q8NGF1 315 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 OR5M1Q8NGP8 315 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 OR10D3Q8NH80 312 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 FAM216AQ8WUB2 273 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 C17orf50Q8WW18 174 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 NXNL1Q96CM4 212 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 CERS2Q96G23 380 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 REXO5Q96IC2 774 aaKnown RBP5.23□□□□□ -1.57
SMG6-219ENST00000575663 BTBD9Q96Q07 612 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 JMJD8Q96S16 334 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 DSN1Q9H410 356 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 ASIC3Q9UHC3 531 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 ASB4Q9Y574 426 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 EML6Q6ZMW3 1958 aa5.23□□□□□ -1.57
SMG6-219ENST00000575663 IGHV4-61A0A0C4DH41 118 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 LOC390937A0A1W2PQ73 354 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 A0A1W2PS29 197 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 CCDC151A5D8V7 595 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 FAM187AA6NFU0 413 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 WASHC1A8K0Z3 465 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 VWC2LB2RUY7 222 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 SMAD9O15198 467 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 TMPRSS11DO60235 418 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 PRAMEF4O60810 478 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 ERLIN1O75477 346 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 EEDO75530 441 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 BCAS2O75934 225 aaPredicted RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 ADAP00813 363 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 ZNF17P17021 662 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 ME2P23368 584 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 MAGEA3P43357 314 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 MAGEA8P43361 318 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 KCNJ1P48048 391 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 CLK3P49761 638 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 PNLIPRP2P54317 469 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 SLC12A2P55011 1212 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 LGALS3BPQ08380 585 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 MAP4K2Q12851 820 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 STX5Q13190 355 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 E2F2Q14209 437 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 ZNF460Q14592 562 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 EXOSC7Q15024 291 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 RNPS1Q15287 305 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 ERCC6LQ2NKX8 1250 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 PRICKLE4Q2TBC4 344 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 AWAT1Q58HT5 328 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 FBXO48Q5FWF7 155 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 TIMM23BQ5SRD1 257 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms