RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MDGA2Q7Z553 956 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 C10orf111Q8N326 155 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 RBMXL3Q8N7X1 1067 aaKnown RBP15.69■□□□□ 0.1
NUP88-210ENST00000574867 OIT3Q8WWZ8 545 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PMM1Q92871 262 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SCMH1Q96GD3 660 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 HOXD1Q9GZZ0 328 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 ABCD2Q9UBJ2 740 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 B3GNT3Q9Y2A9 372 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 KLF13Q9Y2Y9 288 aaPredicted RBP15.69■□□□□ 0.1
NUP88-210ENST00000574867 WDR45Q9Y484 360 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PCDHGA10Q9Y5H3 936 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 CSAG2Q9Y5P2 127 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SLC28A2O43868 658 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 KIAA0513O60268 411 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 NME2P1O60361 137 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 ICOSLGO75144 302 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 BCHEP06276 602 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 NUDT7P0C024 238 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 TFPTP0C1Z6 253 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 NME2P22392 152 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SLC7A2P52569 658 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SNTA1Q13424 505 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SYPL1Q16563 259 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 FLYWCH1Q4VC44 716 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 ZNF766Q5HY98 468 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SLC25A25Q6KCM7 469 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PCSK4Q6UW60 755 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 LRRC74BQ6ZQY2 392 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 GALNT10Q86SR1 603 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 ANKFN1Q8N957 763 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 CATSPER1Q8NEC5 780 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 OR10A6Q8NH74 314 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SLC38A5Q8WUX1 472 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 FBXO34Q9NWN3 711 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 CACNA1BQ00975 2339 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 CNTRLQ7Z7A1 2325 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PRAMEF27A3QJZ7 478 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 ANKRD33BA6NCL7 494 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 B2RBV5 119 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 C5orf58C9J3I9 102 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 HNRNPCL1O60812 293 aaKnown RBP15.68■□□□□ 0.1
NUP88-210ENST00000574867 DNAJA2O60884 412 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 UTS2O95399 124 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 H6PDO95479 791 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 SP1P08047 785 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 CCL3P10147 92 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 SLC30A8Q8IWU4 369 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 SLC15A3Q8IY34 581 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 ZNF527Q8NB42 609 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 C11orf65Q8NCR3 313 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 LSM14AQ8ND56 463 aaKnown RBP15.68■□□□□ 0.1
NUP88-210ENST00000574867 RNF138Q8WVD3 245 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 TMEM19Q96HH6 336 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 SAP130Q9H0E3 1048 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 METTL7AQ9H8H3 244 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 UBQLN4Q9NRR5 601 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 CMTM6Q9NX76 183 aa15.68■□□□□ 0.1
NUP88-210ENST00000574867 CNOT11Q9UKZ1 510 aaKnown RBP15.68■□□□□ 0.1
NUP88-210ENST00000574867 PRAMEF25A6NGN4 478 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 EVI2BP34910 448 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 DCTP40126 519 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 CLK3P49761 638 aaKnown RBP15.67■□□□□ 0.1
NUP88-210ENST00000574867 SLC25A3Q00325 362 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ADRM1Q16186 407 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 TYW3Q6IPR3 259 aaKnown RBP15.67■□□□□ 0.1
NUP88-210ENST00000574867 ERICH5Q6P6B1 374 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 FRRS1Q6ZNA5 592 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ZAR1Q86SH2 424 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 CALHM3Q86XJ0 350 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ZNF619Q8N2I2 560 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 RBM15BQ8NDT2 890 aaKnown RBP15.67■□□□□ 0.1
NUP88-210ENST00000574867 FBXO27Q8NI29 283 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 MAL2Q969L2 176 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 PNPLA2Q96AD5 504 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 REXO5Q96IC2 774 aaKnown RBP15.67■□□□□ 0.1
NUP88-210ENST00000574867 NODALQ96S42 347 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 C1orf21Q9H246 121 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 KLRF1Q9NZS2 232 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.67■□□□□ 0.1
NUP88-210ENST00000574867 FAM220BPB1ANY3 271 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 NME4O00746 187 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ATXN7O15265 892 aaPredicted RBP15.67■□□□□ 0.1
NUP88-210ENST00000574867 CHRM4P08173 479 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 TBXA2RP21731 343 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 CPOXP36551 454 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 CASP3P42574 277 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 GZMMP51124 257 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 CDK6Q00534 326 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ATMQ13315 3056 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 SCARB2Q14108 478 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 LY6DQ14210 128 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 MAPK11Q15759 364 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 GRAMD1BQ3KR37 738 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 SLC6A19Q695T7 634 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 PTOV1Q86YD1 416 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 BBS10Q8TAM1 723 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 OSBPL11Q9BXB4 747 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 SLC38A1Q9H2H9 487 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 HHATLQ9HCP6 504 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms