RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SAP130Q9H0E3 1048 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 MTHFD2LQ9H903 347 aaPredicted RBP22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 POLE3Q9NRF9 147 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 MYOTQ9UBF9 498 aa22.18■■□□□ 1.14
ATPAF1-213ENST00000574428 ZNF354AO60765 605 aaPredicted RBP22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 ABCD3P28288 659 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 VHLP40337 213 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 SLC34A3Q8N130 599 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 GOLM1Q8NBJ4 401 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 OMA1Q96E52 524 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 PYURFQ96I23 114 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 RNF145Q96MT1 663 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 IP6K3Q96PC2 410 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 KCNE5Q9UJ90 142 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 TLX3O43711 291 aaPredicted RBP22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 IL33O95760 270 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 ICAM2P13598 275 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 CD247P20963 164 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 RNF144AP50876 292 aaPredicted RBP22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 SELENOWP63302 87 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 ELOAQ14241 798 aaKnown RBP22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 MAPK14Q16539 360 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 DUSP7Q16829 419 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 VRK2Q86Y07 508 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 SPPL2AQ8TCT8 520 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 SLC47A1Q96FL8 570 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 ADOQ96SZ5 270 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 DOHHQ9BU89 302 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 SPATA5L1Q9BVQ7 753 aa22.17■■□□□ 1.14
ATPAF1-213ENST00000574428 TPST1O60507 370 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 REM1O75628 298 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 OR2J2O76002 312 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 MT-ND1P03886 318 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 PRKAR1AP10644 381 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 UMPSP11172 480 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 SLC7A1P30825 629 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 NRG3P56975 720 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 FCRLBQ6BAA4 426 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 DESI1Q6ICB0 168 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 FKBP9P1Q75LS8 142 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 GPR32P1Q8NGA4 272 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 OR52P1PQ8NH57 321 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 KCNE4Q8WWG9 221 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 DIO2Q92813 273 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 DUS3LQ96G46 650 aaKnown RBP22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 UGT2B28Q9BY64 529 aa22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 CCM2LQ9NUG4 571 aaPredicted RBP22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 MRTO4Q9UKD2 239 aaKnown RBP22.16■■□□□ 1.14
ATPAF1-213ENST00000574428 AGAP5A6NIR3 686 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 NKX2-8O15522 239 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 UGT2B17O75795 530 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 NADKO95544 446 aaPredicted RBP22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 SERPINA7P05543 415 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 PABPC4LP0CB38 370 aaKnown RBP22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 TNFRSF1BP20333 461 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 IL12BP29460 328 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 KRT20P35900 424 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 ZNF311Q5JNZ3 666 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 TBCELQ5QJ74 424 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 DCAF10Q5QP82 559 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 ZFP1Q6P2D0 407 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 KBTBD2Q8IY47 623 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 PEX5LQ8IYB4 626 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 TAGAPQ8N103 731 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 LZICQ8WZA0 190 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 FLRT3Q9NZU0 649 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 AP4S1Q9Y587 144 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 MAN1A2O60476 641 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 GUSBP08236 651 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 RPS4Y1P22090 263 aaKnown RBP22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 DCTP40126 519 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 FAM98BQ52LJ0 330 aaKnown RBP22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 COMTD1Q86VU5 262 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 ZNF443Q9Y2A4 671 aaPredicted RBP22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 NPFFR2Q9Y5X5 522 aa22.15■■□□□ 1.14
ATPAF1-213ENST00000574428 CLDN24A6NM45 220 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 TSPAN2O60636 221 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 KCNJ5P48544 419 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 PSMD4P55036 377 aaKnown RBP22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 KCNJ10P78508 379 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 CHRNB3Q05901 458 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 PDZK1Q5T2W1 519 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 AP1ARQ63HQ0 302 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF248Q8NDW4 579 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 OR4C3Q8NH37 302 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 CACYBPQ9HB71 228 aaKnown RBP22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 PCDHGA10Q9Y5H3 936 aa22.14■■□□□ 1.13
ATPAF1-213ENST00000574428 KLK10O43240 276 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 DBIP07108 87 aaKnown RBP22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 FESP07332 822 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 IL7RP16871 459 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 OR1E2P47887 323 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 ST13P50502 369 aaKnown RBP22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 PSPHP78330 225 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF614Q8N883 585 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 RASSF5Q8WWW0 418 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 POP5Q969H6 163 aaKnown RBP22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 RASL10BQ96S79 203 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 MAGIXQ9H6Y5 334 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms