RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MTX2O75431 263 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PALMO75781 387 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 SERPINI2O75830 405 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 YEATS4O95619 227 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 CRYABP02511 175 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 TPOP07202 933 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 UMODP07911 640 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PVRP15151 417 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF24P17028 368 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 POLR2CP19387 275 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 CYP2A7P20853 494 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 UGT1A1P22309 533 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 S100A1P23297 94 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ARRB2P32121 409 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 RORAP35398 523 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 MDH1P40925 334 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 CAPZBP47756 277 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 TRPC1P48995 793 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 FMO5P49326 533 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 VSNL1P62760 191 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PPP2R2BQ00005 443 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ACY1Q03154 408 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 FOLH1Q04609 750 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PEX6Q13608 980 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 DEFB110Q30KQ9 67 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ANKRD20A8PQ5CZ79 823 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ARMC12Q5T9G4 340 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 CES4AQ5XG92 561 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 KLC3Q6P597 504 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PRSS58Q8IYP2 241 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 MREGQ8N565 214 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ZBTB8BQ8NAP8 495 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 POMGNT2Q8NAT1 580 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 POGLUT1Q8NBL1 392 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 LINC00301Q8NCQ3 95 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 OR2AK2Q8NG84 335 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 LMO3Q8TAP4 145 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 AGAP11Q8TF27 550 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 NAT14Q8WUY8 206 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 IFT81Q8WYA0 676 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 CXorf40BQ96DE9 158 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 DHTKD1Q96HY7 919 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF641Q96N77 438 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 SF3B5Q9BWJ5 86 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 YIPF3Q9GZM5 350 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 STMN4Q9H169 189 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 OR2AG1Q9H205 316 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 DENND2DQ9H6A0 471 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 PCDH9Q9HC56 1237 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 HRASLS2Q9NWW9 162 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 DHCR7Q9UBM7 475 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 GIMAP2Q9UG22 337 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 BAIAP2L1Q9UHR4 511 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 WBP11Q9Y2W2 641 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ZNF711Q9Y462 761 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 SAR1BQ9Y6B6 198 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.91□□□□□ -1.62
SF3B3-214ENST00000572365 COMMD3-BMI1R4GMX3 469 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 ABCA1O95477 2261 aa4.91□□□□□ -1.62
SF3B3-214ENST00000572365 SCN3AQ9NY46 2000 aa4.9□□□□□ -1.62
SF3B3-214ENST00000572365 CPAMD8Q8IZJ3 1885 aa4.9□□□□□ -1.62
SF3B3-214ENST00000572365 FREM3P0C091 2139 aa4.9□□□□□ -1.62
SF3B3-214ENST00000572365 A0A0G2JNG1 304 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 A0A1B0GVL5 298 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 hCG_1809904A0A1W2PP81 198 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 A0A1W2PPE2 198 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 A0A1W2PR64 198 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 OR6C74A6NCV1 312 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 C9J4A7 227 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 NPIPA5E9PKD4 350 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CETN3O15182 167 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 TOX3O15405 576 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 JCHAINP01591 159 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RPSAP08865 295 aaKnown RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RHOXF2BP0C7M4 288 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 IGHV4-30-4P0DP06 118 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ACADSP16219 412 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 XRCC1P18887 633 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 UGT1A4P22310 534 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CALB2P22676 271 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ARSEP51690 589 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CLCNKAP51800 687 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 KPNA2P52292 529 aaKnown RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 STX17P56962 302 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 MAXP61244 160 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 POLR2LP62875 67 aaKnown RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ELF3P78545 371 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 PHEXP78562 749 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RUNX1T1Q06455 604 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 TRAF2Q12933 501 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 IFT88Q13099 833 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 KIR2DS5Q14953 304 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 NDUFA5Q16718 116 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 SLC25A52Q3SY17 297 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC153Q494R4 210 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 HSP90AA5PQ58FG0 334 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF789Q5FWF6 425 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 LRRC66Q68CR7 880 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms