RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 LACC1Q8IV20 430 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 SLC16A11Q8NCK7 471 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 OR2M3Q8NG83 312 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 OR5M1Q8NGP8 315 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 DUSP19Q8WTR2 217 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 FAM120BQ96EK7 910 aaKnown RBP16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 SORT1Q99523 831 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 TUBA1CQ9BQE3 449 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 AKTIPQ9H8T0 292 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 SDHAF3Q9NRP4 125 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 FAM120CQ9NX05 1096 aaKnown RBP16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 ABCG2Q9UNQ0 655 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 RAP2CQ9Y3L5 183 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 ACTL7BQ9Y614 415 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 CFLARO15519 480 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 ZIC3O60481 467 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 IL2RAP01589 272 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 ALOX5P09917 674 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 HK1P19367 917 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 RPL14P50914 215 aaKnown RBP16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 GFRA1P56159 465 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 PRR5P85299 388 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 EMX2Q04743 252 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 RCAN2Q14206 197 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 LASP1Q14847 261 aaKnown RBP16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 RAET1LQ5VY80 246 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 NSUN5P2Q63ZY6 315 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 AAGABQ6PD74 315 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 ENPP6Q6UWR7 440 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 APOOLQ6UXV4 268 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 ZAR1Q86SH2 424 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 FADS6Q8N9I5 356 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 C9orf106Q8NAJ2 232 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 GATSQ8NAP1 163 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 RELL2Q8NC24 303 aaPredicted RBP16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 OR5P2Q8WZ92 322 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 PRPF18Q99633 342 aaKnown RBP16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 NUF2Q9BZD4 464 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 CXorf36Q9H7Y0 433 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 ATAD3AQ9NVI7 634 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 PNPOQ9NVS9 261 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 NTMQ9P121 344 aa16.13■□□□□ 0.17
CTDNEP1-207ENST00000572043 TMEM120BA0PK00 339 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 TTC36A6NLP5 189 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 ERLIN1O75477 346 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 KCNK2O95069 426 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 ANGPTL1O95841 491 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 HMGN2P05204 90 aaKnown RBP16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 IGFBP2P18065 325 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 PRPS1L1P21108 318 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 CEACAM8P31997 349 aaPredicted RBP16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 SOAT1P35610 550 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 MAP3K8P41279 467 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 PRIM2P49643 509 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 LHX2P50458 406 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 ZNF136P52737 540 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 DGKQP52824 942 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 DIO3P55073 304 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 DSCR4P56555 118 aaPredicted RBP16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 KRTAP10-9P60411 292 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 TLE4Q04727 773 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 BST1Q10588 318 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 MAD2L1Q13257 205 aaPredicted RBP16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 TP53BP2Q13625 1128 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 MLC1Q15049 377 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 SF3B4Q15427 424 aaKnown RBP eCLIP16.12■□□□□ 0.179e-6■■■■■ 27.7
CTDNEP1-207ENST00000572043 SLC25A35Q3KQZ1 300 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 UBQLNLQ8IYU4 475 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 COX18Q8N8Q8 333 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 ACBD4Q8NC06 268 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 OR4C3Q8NH37 302 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 OR5AK3PQ8NH89 298 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 HOXB13Q92826 284 aaPredicted RBP16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 DTNBP1Q96EV8 351 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 DUSP26Q9BV47 211 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 FBXO34Q9NWN3 711 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 NOP53Q9NZM5 478 aaKnown RBP16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 ZNF407Q9C0G0 2248 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 GTF3C1Q12789 2109 aa16.12■□□□□ 0.17
CTDNEP1-207ENST00000572043 CD8B2A6NJW9 211 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 CLCA1A8K7I4 914 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 DVL2O14641 736 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 CPN1P15169 458 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 SSTR2P30874 369 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 UQCRC1P31930 480 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 TIMP3P35625 211 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 CCT3P49368 545 aaKnown RBP16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 RNF144AP50876 292 aaPredicted RBP16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 MAGOHP61326 146 aaKnown RBP16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 DMRTC2Q8IXT2 367 aaPredicted RBP16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 ZPLD1Q8TCW7 415 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 CDS1Q92903 461 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 COQ8BQ96D53 544 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 LURAP1Q96LR2 239 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.11■□□□□ 0.17
CTDNEP1-207ENST00000572043 NINQ8N4C6 2090 aa16.1■□□□□ 0.17
CTDNEP1-207ENST00000572043 EXPH5Q8NEV8 1989 aa16.1■□□□□ 0.17
CTDNEP1-207ENST00000572043 MBD3L4A6NDZ8 208 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms