RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 PRPS2P11908 318 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 BCKDHAP12694 445 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 MANFP55145 182 aaKnown RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 DSCR4P56555 118 aaPredicted RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 B3GALT5-AS1P59052 145 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 PSPHP78330 225 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 GRAMD1BQ3KR37 738 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 AAGABQ6PD74 315 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 GRAMD2AQ8IUY3 354 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 FADS6Q8N9I5 356 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 GATSQ8NAP1 163 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 NUP43Q8NFH3 380 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 LINC01560Q8TB33 94 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 DUSP19Q8WTR2 217 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 C16orf58Q96GQ5 468 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 METTL2AQ96IZ6 378 aaKnown RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 PKNOX2Q96KN3 472 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 C3orf30Q96M34 536 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 POLDIP3Q9BY77 421 aaKnown RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 CLCF1Q9UBD9 225 aa12.45□□□□□ -0.42
RAB40B-204ENST00000571554 HRNRQ86YZ3 2850 aaPredicted RBP12.45□□□□□ -0.42
RAB40B-204ENST00000571554 MPDZO75970 2070 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
RAB40B-204ENST00000571554 WDR91A4D1P6 747 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 H3BML4 177 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 SEC14L5O43304 696 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 CTAG2O75638 210 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 KCNH1O95259 989 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 TGM6O95932 706 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ZNF708P17019 499 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 OPRM1P35372 400 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 PDE7AQ13946 482 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 FLYWCH1Q4VC44 716 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 APOOLQ6UXV4 268 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ZAR1Q86SH2 424 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ADGRE4PQ86SQ3 457 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 OR7A2PQ8NGA2 310 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ZFP28Q8NHY6 868 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 SMPDL3BQ92485 455 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 JADE3Q92613 823 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ZBED6CLQ96FA7 236 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-204ENST00000571554 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 TBL1XR1Q9BZK7 514 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
RAB40B-204ENST00000571554 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 FBXO34Q9NWN3 711 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 FAM120CQ9NX05 1096 aaKnown RBP12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ZDHHC2Q9UIJ5 367 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 ABCG2Q9UNQ0 655 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 AKAP6Q13023 2319 aa12.44□□□□□ -0.42
RAB40B-204ENST00000571554 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 LYPLA1O75608 230 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 RCBTB2O95199 551 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 ANGPTL1O95841 491 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 BPGMP07738 259 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 FGF4P08620 206 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CHMP24386 653 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 DNAJA1P31689 397 aaKnown RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CPA2P48052 419 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CLK3P49761 638 aaKnown RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 SUCLG1P53597 346 aaKnown RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 PTGR1Q14914 329 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 TESK1Q15569 626 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 DUSP5Q16690 384 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CCNJQ5T5M9 372 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 EMBQ6PCB8 327 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 RNF165Q6ZSG1 346 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 P4HA3Q7Z4N8 544 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 SLC16A11Q8NCK7 471 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 WNT2BQ93097 391 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CAVIN3Q969G5 261 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 GIMAP5Q96F15 307 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CHMP6Q96FZ7 201 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 PPP1R36Q96LQ0 422 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 MS4A4EQ96PG1 132 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 TM9SF2Q99805 663 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 RBM24Q9BX46 236 aaKnown RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 ROPN1BQ9BZX4 212 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 CLEC4MQ9H2X3 399 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 ZNF395Q9H8N7 513 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 ROPN1Q9HAT0 212 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 C3orf14Q9HBI5 128 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 SDHAF3Q9NRP4 125 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 MRTO4Q9UKD2 239 aaKnown RBP12.43□□□□□ -0.42
RAB40B-204ENST00000571554 VDAC3Q9Y277 283 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 TMED5Q9Y3A6 229 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 ZNF337Q9Y3M9 751 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 SNX8Q9Y5X2 465 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 HIVEP1P15822 2718 aa12.43□□□□□ -0.42
RAB40B-204ENST00000571554 OR2M5A3KFT3 312 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 TUBAL3A6NHL2 446 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 A6NNC1 897 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 SCAMP2O15127 329 aaKnown RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 EMC8O43402 210 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 TBX19O60806 448 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 NKX2-2O95096 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms