RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 EIF1AXP47813 144 aaKnown RBP9.9□□□□□ -0.82
VPS53-207ENST00000570510 ALDH18A1P54886 795 aaKnown RBP9.9□□□□□ -0.82
VPS53-207ENST00000570510 CDH11P55287 796 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 EFR3AQ14156 821 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 ELOA3BQ3SY89 546 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 PRAMEF9Q5VWM5 478 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 ZNF525Q8N782 197 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 ELOA3Q8NG57 546 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 OR7G3Q8NG95 312 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 PROX1Q92786 737 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 TMBIM1Q969X1 311 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 ATOH8Q96SQ7 321 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 ADOQ96SZ5 270 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 PAFAH2Q99487 392 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 MTERF1Q99551 399 aaKnown RBP9.9□□□□□ -0.82
VPS53-207ENST00000570510 GRIP2Q9C0E4 1043 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 DSN1Q9H410 356 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 C12orf49Q9H741 205 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 EML4Q9HC35 981 aaKnown RBP9.9□□□□□ -0.82
VPS53-207ENST00000570510 XPR1Q9UBH6 696 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 PRODH2Q9UF12 536 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 POU2F3Q9UKI9 436 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 NFU1Q9UMS0 254 aa9.9□□□□□ -0.82
VPS53-207ENST00000570510 MEGF8Q7Z7M0 2845 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 A0A096LNT2 108 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 A0A096LPK6 155 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 HMX2A2RU54 273 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 GOLGA6L10A6NI86 522 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 OR6C70A6NIJ9 312 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 EIF1AYO14602 144 aaKnown RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 PGRMC2O15173 223 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 TAPBPO15533 448 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 PHGDHO43175 533 aaKnown RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 RIPK2O43353 540 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 NDUFB5O43674 189 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 TGFAP01135 160 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CD8AP01732 235 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 THBS1P07996 1170 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CSF3P09919 207 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CPMP14384 443 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 PORP16435 677 aaPredicted RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 EGR1P18146 543 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 ADH6P28332 368 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CLDN20P56880 219 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 C21orf58P58505 322 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 MRPS22P82650 360 aaKnown RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 GGTLC2Q14390 218 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 ZNF460Q14592 562 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 EXOSC7Q15024 291 aaKnown RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 MROH9Q5TGP6 573 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 GTF2IRD2BQ6EKJ0 949 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 FIGNL1Q6PIW4 674 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 DNAJC14Q6Y2X3 702 aaPredicted RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 GTF2IRD2Q86UP8 949 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 TDRPQ86YL5 185 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CENPLQ8N0S6 344 aaPredicted RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.89□□□□□ -0.83
VPS53-207ENST00000570510 OR52B6Q8NGF0 335 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 OR5M1Q8NGP8 315 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 HUS1BQ8NHY5 278 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 HTRA1Q92743 480 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 EXT2Q93063 718 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 C3orf49Q96BT1 292 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 TMEM79Q9BSE2 394 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CD244Q9BZW8 370 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 TRIM2Q9C040 744 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 OCEL1Q9H607 264 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 CAB39LQ9H9S4 337 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 SDHAF3Q9NRP4 125 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 GLRX2Q9NS18 164 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 ASB4Q9Y574 426 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 SVEP1Q4LDE5 3571 aa9.89□□□□□ -0.83
VPS53-207ENST00000570510 EXOC1LA0A1B0GW35 172 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 A0A1W2PS29 197 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 SLC35F4A4IF30 521 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 STX16-NPEPL1H3BU86 382 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 K7EPI3 171 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 STX16O14662 325 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 SCO2O43819 266 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 EEDO75530 441 aaKnown RBP9.88□□□□□ -0.83
VPS53-207ENST00000570510 GBAP04062 536 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 GSTA1P08263 222 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 APEHP13798 732 aaKnown RBP9.88□□□□□ -0.83
VPS53-207ENST00000570510 IL11P20809 199 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 DRD5P21918 477 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 PIK3CBP42338 1070 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 PPICP45877 212 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 B3GALT5-AS1P59052 145 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 IRX1P78414 480 aaPredicted RBP9.88□□□□□ -0.83
VPS53-207ENST00000570510 IRF9Q00978 393 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 ZNF844Q08AG5 666 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 GANABQ14697 944 aaKnown RBP9.88□□□□□ -0.83
VPS53-207ENST00000570510 GUSBP1Q15486 140 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 TAB1Q15750 504 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 FAM174BQ3ZCQ3 159 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 IQCCQ4KMZ1 466 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 PDLIM3Q53GG5 364 aaPredicted RBP9.88□□□□□ -0.83
VPS53-207ENST00000570510 LIPJQ5W064 366 aa9.88□□□□□ -0.83
VPS53-207ENST00000570510 WDR93Q6P2C0 686 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms