RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MAP3K8P41279 467 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 FOXD4Q12950 439 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 SF3B4Q15427 424 aaKnown RBP eCLIP12.5□□□□□ -0.414e-9■■■■■ 35.1
GTF3C1-211ENST00000569653 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 VWA1Q6PCB0 445 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 ENPP6Q6UWR7 440 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 ZAR1Q86SH2 424 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 BANPQ8N9N5 519 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 FIG4Q92562 907 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 GFM2Q969S9 779 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 LMF2Q9BU23 707 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 TMEM109Q9BVC6 243 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 STMN4Q9H169 189 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 SENP1Q9P0U3 644 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 PPP4R1LQ9P1A2 415 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 OR10H1Q9Y4A9 318 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 ARID1AO14497 2285 aa12.5□□□□□ -0.41
GTF3C1-211ENST00000569653 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 TMEM233B4DJY2 109 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 IL33O95760 270 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 SDC1P18827 310 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 KLK2P20151 261 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 PRPH2P23942 346 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 PEX19P40855 299 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 GSTM5P46439 218 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 CLDN20P56880 219 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 PCLAFQ15004 111 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 TMEM44Q2T9K0 475 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 KRT71Q3SY84 523 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 CYP27C1Q4G0S4 372 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 C22orf34Q6ZV56 151 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 MARCH3Q86UD3 253 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 EXOC3L1Q86VI1 746 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 C10orf107Q8IVU9 208 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 UBQLNLQ8IYU4 475 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 OR4K17Q8NGC6 315 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 PIK3R3Q92569 461 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 ZBTB9Q96C00 473 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 STARD4Q96DR4 205 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 GIMAP5Q96F15 307 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF845Q96IR2 970 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 ZFP3Q96NJ6 502 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 TM9SF2Q99805 663 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 GATA5Q9BWX5 397 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 MIEF1Q9NQG6 463 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 FAM120CQ9NX05 1096 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 GIMAP2Q9UG22 337 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF337Q9Y3M9 751 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
GTF3C1-211ENST00000569653 OR2M5A3KFT3 312 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 A8MXE2 369 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 COQ9O75208 318 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 UTS2O95399 124 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 ACP2P11117 423 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 CD99P14209 185 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 HK1P19367 917 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 ARRB2P32121 409 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 KRT20P35900 424 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 KIR2DL2P43627 348 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 DSCR4P56555 118 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 ADAM8P78325 824 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 FAM27E3Q08E93 113 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 IMPG1Q17R60 797 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 GRAMD1BQ3KR37 738 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 RFTN2Q52LD8 501 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 AAGABQ6PD74 315 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 IKBIPQ70UQ0 350 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 BTLAQ7Z6A9 289 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 CLHC1Q8NHS4 586 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 FBXO30Q8TB52 745 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 DUSP19Q8WTR2 217 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 NUDT8Q8WV74 236 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 MBD6Q96DN6 1003 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 C1GALT1C1Q96EU7 318 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 OTUB1Q96FW1 271 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 POM121Q96HA1 1249 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 FAM111AQ96PZ2 611 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 TRMOQ9BU70 441 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 GSX1Q9H4S2 264 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 EQTNQ9NQ60 294 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 DDX18Q9NVP1 670 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 FBXO34Q9NWN3 711 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 BAIAP2L1Q9UHR4 511 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 TESMINQ9Y4I5 508 aa12.48□□□□□ -0.41
GTF3C1-211ENST00000569653 IGLV3-32A0A0A0MS00 114 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 SH3D21A4FU49 640 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 RGS16O15492 202 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 AKAP10O43572 662 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms