RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GXYLT2A0PJZ3 443 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 FADS1O60427 444 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 TNFRSF21O75509 655 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 IGHV4-39P01824 125 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 KRT20P35900 424 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 PSG6Q00889 435 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 EFR3AQ14156 821 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 SGCBQ16585 318 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 MFSD12Q6NUT3 480 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 ZNF611Q8N823 705 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 KBTBD8Q8NFY9 601 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 HTRA1Q92743 480 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 MTBPQ96DY7 904 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 APIPQ96GX9 242 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 TMEM204Q9BSN7 226 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 NTMT1Q9BV86 223 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 CXorf56Q9H5V9 222 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 AHSPQ9NZD4 102 aa13.29□□□□□ -0.28
USB1-214ENST00000568848 MRPS18CQ9Y3D5 142 aaKnown RBP13.29□□□□□ -0.28
USB1-214ENST00000568848 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 PHF1O43189 567 aaPredicted RBP13.28□□□□□ -0.28
USB1-214ENST00000568848 CXCL13O43927 109 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 IGKV1D-16P01601 117 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 SBK3P0C264 359 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 PAX1P15863 534 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 IL11P20809 199 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 SHC1P29353 583 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 TYK2P29597 1187 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 STX2P32856 288 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 EEF1A1P68104 462 aaKnown RBP13.28□□□□□ -0.28
USB1-214ENST00000568848 CAV1Q03135 178 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 BTKQ06187 659 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 CKAP4Q07065 602 aaKnown RBP13.28□□□□□ -0.28
USB1-214ENST00000568848 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.28□□□□□ -0.28
USB1-214ENST00000568848 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 HEPHL1Q6MZM0 1159 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 TMEM107Q6UX40 140 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 CYS1Q717R9 158 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 CDYL2Q8N8U2 506 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 FBXO30Q8TB52 745 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 ZNF675Q8TD23 568 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 TRPC4APQ8TEL6 797 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 S100PBPQ96BU1 408 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 C1GALT1C1Q96EU7 318 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 PRRG4Q9BZD6 226 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 RYDENQ9NUL5 291 aaKnown RBP13.28□□□□□ -0.28
USB1-214ENST00000568848 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
USB1-214ENST00000568848 ZNF175Q9Y473 711 aa13.28□□□□□ -0.28
USB1-214ENST00000568848 MANBAO00462 879 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 PCDH7O60245 1069 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 PLGP00747 810 aaPredicted RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 JUNP05412 331 aaKnown RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 GSTA2P09210 222 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 PNLIPRP2P54317 469 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 RPS4XP62701 263 aaKnown RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 ERCC6LQ2NKX8 1250 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 C8orf74Q6P047 294 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 EXOC3L1Q86VI1 746 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 METTL25Q8N6Q8 603 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 OR10D3Q8NH80 312 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 ZNF483Q8TF39 744 aaPredicted RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 OTUB1Q96FW1 271 aaPredicted RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 KCNA7Q96RP8 456 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 FAIM2Q9BWQ8 316 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 SLCO5A1Q9H2Y9 848 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 LIPT1Q9Y234 373 aa13.27□□□□□ -0.29
USB1-214ENST00000568848 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.29
USB1-214ENST00000568848 TNFSF11O14788 317 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 ABCB7O75027 752 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 DANCRP0C864 163 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 SERPINB8P50452 374 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 GUCY2DQ02846 1103 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 ADAM5Q6NVV9 412 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 KLC3Q6P597 504 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.26□□□□□ -0.29
USB1-214ENST00000568848 NUFIP2Q7Z417 695 aaKnown RBP13.26□□□□□ -0.29
USB1-214ENST00000568848 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 C16orf78Q8WTQ4 265 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 PIK3R3Q92569 461 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 ACPTQ9BZG2 426 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 ZDHHC18Q9NUE0 388 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 SENP1Q9P0U3 644 aa13.26□□□□□ -0.29
USB1-214ENST00000568848 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 GNG14A0A1W2PPG7 69 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 A8MT66 165 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 OVOL3O00110 214 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 CD5LO43866 347 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 RAMP1O60894 148 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 SS18L1O75177 396 aaPredicted RBP13.25□□□□□ -0.29
USB1-214ENST00000568848 GUCY1B2O75343 617 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 EDNRAP25101 427 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 PCYT1AP49585 367 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 CTBP2P56545 445 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 OCRLQ01968 901 aa13.25□□□□□ -0.29
USB1-214ENST00000568848 ILF2Q12905 390 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms