RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 STX2P32856 288 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 TRA2BP62995 288 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 FAPQ12884 760 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 TRAF3Q13114 568 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 NAB1Q13506 487 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 CTU2Q2VPK5 515 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 KRTAP24-1Q3LI83 254 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 GGNQ86UU5 652 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 PTGR2Q8N8N7 351 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 KAT2AQ92830 837 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 S100PBPQ96BU1 408 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 MTBPQ96DY7 904 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 AMBRA1Q9C0C7 1298 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 BRF2Q9HAW0 419 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 GLRX2Q9NS18 164 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 FAM120CQ9NX05 1096 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 SENP1Q9P0U3 644 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 PRR14LQ5THK1 2151 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 CCDC188H7C350 402 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 PLOD3O60568 738 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 COQ9O75208 318 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 KLHL2O95198 593 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 FESP07332 822 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 ZNF17P17021 662 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 CLK3P49761 638 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 PSG6Q00889 435 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 ZNF155Q12901 538 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 CALCOCO2Q13137 446 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 TMEM44Q2T9K0 475 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 ZNF672Q499Z4 452 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 CYP27C1Q4G0S4 372 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 NCMAPQ5T1S8 102 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 LGSNQ5TDP6 509 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 DNAJC14Q6Y2X3 702 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 C1orf52Q8N6N3 182 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 OR10D3Q8NH80 312 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 DUSP19Q8WTR2 217 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 SELENOMQ8WWX9 145 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 PHF21BQ96EK2 531 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 C11orf24Q96F05 449 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 HDHD5Q9BXW7 423 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 RTN4RQ9BZR6 473 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 ALG2Q9H553 416 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 FARSBQ9NSD9 589 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 GIMAP4Q9NUV9 329 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 NMRK1Q9NWW6 199 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 FLRT3Q9NZU0 649 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 PCTPQ9UKL6 214 aa10.54□□□□□ -0.72
GTF3C1-209ENST00000568569 CR1P17927 2039 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 A0A096LPK6 155 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 STX16-NPEPL1H3BU86 382 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 STX16O14662 325 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 DLX3O60479 287 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 NDUFS7O75251 213 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 SYNGR4O95473 234 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 PDYNP01213 254 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 TUBBP07437 444 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 CTAGE8P0CG41 777 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 AGTR1P30556 359 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 NRF1Q16656 503 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 DECR1Q16698 335 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 TMEM249Q2WGJ8 235 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 PGGHGQ32M88 737 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 TECRLQ5HYJ1 363 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 SH2D4BQ5SQS7 431 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 MROH9Q5TGP6 573 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 EXOC3L1Q86VI1 746 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 CREG2Q8IUH2 290 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 WDR75Q8IWA0 830 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 CTAGE4Q8IX94 777 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 FAM9CQ8IZT9 166 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 OR7G2Q8NG99 324 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 OR4F6Q8NGB9 312 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 FBF1Q8TES7 1133 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 NEUROG1Q92886 237 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 EXOSC8Q96B26 276 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 NSUN5Q96P11 429 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 GPR78Q96P69 363 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 RHNO1Q9BSD3 238 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 C19orf24Q9BVV8 132 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 BEX2Q9BXY8 128 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 GRIP2Q9C0E4 1043 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 C12orf49Q9H741 205 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 FAIMQ9NVQ4 179 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 TMEM160Q9NX00 188 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 XPR1Q9UBH6 696 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 LPAR3Q9UBY5 353 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 MRTO4Q9UKD2 239 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 TMCO1Q9UM00 188 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 SNX6Q9UNH7 406 aa10.53□□□□□ -0.72
GTF3C1-209ENST00000568569 IGHV4-30-2A0A087WSY4 118 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 IGLV3-32A0A0A0MS00 114 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 SHISA8B8ZZ34 492 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 ADAMDEC1O15204 470 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 GPRIN2O60269 458 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 OTCP00480 354 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 IL3P08700 152 aa10.52□□□□□ -0.73
GTF3C1-209ENST00000568569 IL32P24001 234 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms