RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 POU6F2P78424 691 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF155Q12901 538 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 SLC13A2Q13183 592 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 MFSD4BQ5TF39 518 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 MEDAGQ5VYS4 303 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 ACSM5Q6NUN0 579 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF367Q7RTV3 350 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 SDR16C5Q8N3Y7 309 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 OR52R1Q8NGF1 315 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 LGALS12Q96DT0 336 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 FAM46AQ96IP4 442 aaKnown RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 PLA2G12AQ9BZM1 189 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 EGLN3Q9H6Z9 239 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 CNIH4Q9P003 139 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 PLCL2Q9UPR0 1127 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 CEP192Q8TEP8 1941 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 LAMA1P25391 3075 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 NKX2-2O95096 273 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 NSA2O95478 260 aaKnown RBP16.86■□□□□ 0.29
SMPD3-211ENST00000568373 MLLT3P42568 568 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-211ENST00000568373 PPM1FP49593 454 aaPredicted RBP16.86■□□□□ 0.29
SMPD3-211ENST00000568373 BMXP51813 675 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 GFERP55789 205 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 SLC25A30Q5SVS4 291 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 FIGNL1Q6PIW4 674 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 OGFOD3Q6PK18 319 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 RASSF6Q6ZTQ3 369 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 SLC46A3Q7Z3Q1 461 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 GALNT12Q8IXK2 581 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 CAMKK1Q8N5S9 505 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 TEX47Q8TBZ9 253 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 PMM1Q92871 262 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 PEX11GQ96HA9 241 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 TGM7Q96PF1 710 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 KCNE5Q9UJ90 142 aa16.86■□□□□ 0.29
SMPD3-211ENST00000568373 MRPS33Q9Y291 106 aaKnown RBP16.86■□□□□ 0.29
SMPD3-211ENST00000568373 RPL36Q9Y3U8 105 aaKnown RBP16.86■□□□□ 0.29
SMPD3-211ENST00000568373 GXYLT2A0PJZ3 443 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 HYKKA2RU49 373 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 BLACEA4D250 179 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 TLCD2A6NGC4 264 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 EFCAB9A8MZ26 197 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 PEX12O00623 359 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 TLX2O43763 284 aaPredicted RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 BRINP1O60477 761 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SDC3O75056 442 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 S1PR1P21453 382 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 EFNB1P98172 346 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 C14orf28Q4W4Y0 310 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 MRPL2Q5T653 305 aaKnown RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 GARNL3Q5VVW2 1013 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SLCO6A1Q86UG4 719 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 RANBP3LQ86VV4 465 aaPredicted RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF595Q8IYB9 648 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 DYNC2LI1Q8TCX1 351 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 ADAMTS18Q8TE60 1221 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 BORCS5Q969J3 196 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SPACA7Q96KW9 195 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 POLE3Q9NRF9 147 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SOHLH2Q9NX45 425 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 IGHV5-51A0A0C4DH38 117 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 CDHR4A6H8M9 788 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 TGFBR3LH3BV60 316 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 HRO43593 1189 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 AIREO43918 545 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 CTNSO60931 367 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SOX30O94993 753 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 DBTP11182 482 aaKnown RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 FPR3P25089 353 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 MAT1AQ00266 395 aaKnown RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF91Q05481 1191 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 STX4Q12846 297 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 ARMCX4Q5H9R4 360 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SLC27A4Q6P1M0 643 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 MBOAT2Q6ZWT7 520 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 BCDIN3DQ7Z5W3 292 aaKnown RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 OR6C4Q8NGE1 309 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 WDR36Q8NI36 951 aaKnown RBP16.85■□□□□ 0.29
SMPD3-211ENST00000568373 TMEM255BQ8WV15 326 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 FGF11Q92914 225 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 RIT1Q92963 219 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 DSN1Q9H410 356 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 IRAK4Q9NWZ3 460 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 SLC7A7Q9UM01 511 aa16.85■□□□□ 0.29
SMPD3-211ENST00000568373 NPIPA5A0A0B4J1W7 369 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 NPIPA7E9PJI5 369 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 CDC123O75794 336 aaPredicted RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 NPIPA8P0DM63 369 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 GADD45AP24522 165 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 CSNK1EP49674 416 aaKnown RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 IGLV3-21P80748 117 aaPredicted RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 NCF4Q15080 339 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 DGUOKQ16854 277 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 SYT14P1Q58G82 188 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 AP1ARQ63HQ0 302 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 MRGPREQ86SM8 312 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 NRMQ8IXM6 262 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 OR8D4Q8NGM9 314 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms