RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ACY1Q03154 408 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 DUSP8Q13202 625 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 DSG2Q14126 1118 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 DGCR6Q14129 220 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 DUSP5Q16690 384 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ZSWIM7Q19AV6 140 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 EXOC3L2Q2M3D2 409 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 TRMT12Q53H54 448 aaKnown RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 TSPYL5Q86VY4 417 aaPredicted RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 OFCC1Q8IZS5 231 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF619Q8N2I2 560 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 COX18Q8N8Q8 333 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 OR4D9Q8NGE8 314 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 SLC9A6Q92581 669 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 CDS1Q92903 461 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 RIT1Q92963 219 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 PRRC1Q96M27 445 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ALPK1Q96QP1 1244 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ARHGDIGQ99819 225 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 LMF2Q9BU23 707 aaKnown RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ALOXE3Q9BYJ1 711 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 GRIP2Q9C0E4 1043 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 POLR2J2Q9GZM3 115 aaKnown RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF350Q9GZX5 532 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 POLR2J3Q9H1A7 115 aaKnown RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ANKRD19PQ9H560 264 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 PAPOLBQ9NRJ5 636 aaKnown RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 MGAT4BQ9UQ53 548 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 E9PQ18 207 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 SIGLEC6O43699 453 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 DYRK3O43781 588 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 UGT2B17O75795 530 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 CBX7O95931 251 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 ADAP00813 363 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 DBIP07108 87 aaKnown RBP13.58□□□□□ -0.24
COMMD4-221ENST00000567935 PIGAP37287 484 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 SEPHS1P49903 392 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 NUP107P57740 925 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 GABARAPL2P60520 117 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-221ENST00000567935 CHRNEQ04844 493 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 NFATC3Q12968 1075 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 DCST1Q5T197 706 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 BROXQ5VW32 411 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 MLIPQ5VWP3 458 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 FRRS1Q6ZNA5 592 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF248Q8NDW4 579 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 OR7G1Q8NGA0 311 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 OR52P1PQ8NH57 321 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 ADAMTS16Q8TE57 1224 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 FBLIM1Q8WUP2 373 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 OIT3Q8WWZ8 545 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 SDF2Q99470 211 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 FEVQ99581 238 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 BARD1Q99728 777 aaKnown RBP13.58□□□□□ -0.24
COMMD4-221ENST00000567935 RIBC2Q9H4K1 309 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 NMNAT1Q9HAN9 279 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-221ENST00000567935 NDRG4Q9ULP0 352 aaKnown RBP13.58□□□□□ -0.24
COMMD4-221ENST00000567935 GMPPBQ9Y5P6 360 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 HEMK1Q9Y5R4 338 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-221ENST00000567935 KCNE3Q9Y6H6 103 aa13.58□□□□□ -0.24
COMMD4-221ENST00000567935 SPTAN1Q13813 2472 aaKnown RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 SPTBP11277 2137 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 A0A1B0GX78 115 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 KIAA0513O60268 411 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 CLIC3O95833 236 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 CCDC159P0C7I6 412 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 CBLP22681 906 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 HLCSP50747 726 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 PDX1P52945 283 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 UCNP55089 124 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 CXCR4P61073 352 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 ESRRGP62508 458 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 CSNK2BP67870 215 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 TEKQ02763 1124 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF155Q12901 538 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 NPRL3Q12980 569 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 LAPTM4AQ15012 233 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 DCST2Q5T1A1 773 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 TYW3Q6IPR3 259 aaKnown RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF574Q6ZN55 896 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 QSOX2Q6ZRP7 698 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 BPHLQ86WA6 291 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 GATAD2AQ86YP4 633 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 SLC5A8Q8N695 610 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 OR52R1Q8NGF1 315 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 OR1L3Q8NH93 324 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 VANGL1Q8TAA9 524 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF566Q969W8 418 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 OTUB1Q96FW1 271 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 HRASLS5Q96KN8 279 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 FNDC11Q9BVV2 318 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 SOX17Q9H6I2 414 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms