RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
PALB2-205ENST00000567003 MANBAO00462 879 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 EIF1AYO14602 144 aaKnown RBP13.87□□□□□ -0.19
PALB2-205ENST00000567003 PCDH7O60245 1069 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 SMIM24O75264 130 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 EIF1AXP47813 144 aaKnown RBP13.87□□□□□ -0.19
PALB2-205ENST00000567003 RFX3P48380 749 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 RPS3AP61247 264 aaKnown RBP13.87□□□□□ -0.19
PALB2-205ENST00000567003 TRA2BP62995 288 aaKnown RBP13.87□□□□□ -0.19
PALB2-205ENST00000567003 PSG6Q00889 435 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 ZNF844Q08AG5 666 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 FGFBP1Q14512 234 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 GANABQ14697 944 aaKnown RBP13.87□□□□□ -0.19
PALB2-205ENST00000567003 SGCBQ16585 318 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 FAM9CQ8IZT9 166 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 CDYL2Q8N8U2 506 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 NEUROG1Q92886 237 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 NPAS1Q99742 590 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 TMEM204Q9BSN7 226 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 EBPLQ9BY08 206 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 STMN4Q9H169 189 aaPredicted RBP13.87□□□□□ -0.19
PALB2-205ENST00000567003 VPS29Q9UBQ0 182 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 SNX6Q9UNH7 406 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 EMC9Q9Y3B6 208 aa13.87□□□□□ -0.19
PALB2-205ENST00000567003 CADP27708 2225 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 OTCP00480 354 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 RBP1P09455 135 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 CDKN1AP38936 164 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 HTR6P50406 440 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 RPS4XP62701 263 aaKnown RBP13.86□□□□□ -0.19
PALB2-205ENST00000567003 MRPS22P82650 360 aaKnown RBP13.86□□□□□ -0.19
PALB2-205ENST00000567003 HEPHL1Q6MZM0 1159 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 OR6K3Q8NGY3 331 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 LILRB1Q8NHL6 650 aaPredicted RBP13.86□□□□□ -0.19
PALB2-205ENST00000567003 CDC26Q8NHZ8 85 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 C16orf78Q8WTQ4 265 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 GFM2Q969S9 779 aaKnown RBP13.86□□□□□ -0.19
PALB2-205ENST00000567003 ERP27Q96DN0 273 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 APIPQ96GX9 242 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 REG4Q9BYZ8 158 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 PRRG4Q9BZD6 226 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 SLC35C2Q9NQQ7 365 aa13.86□□□□□ -0.19
PALB2-205ENST00000567003 GNG14A0A1W2PPG7 69 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 ESYT3A0FGR9 886 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 PLOD3O60568 738 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 SS18L1O75177 396 aaPredicted RBP13.85□□□□□ -0.19
PALB2-205ENST00000567003 PLGP00747 810 aaPredicted RBP13.85□□□□□ -0.19
PALB2-205ENST00000567003 SOD3P08294 240 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 SBK3P0C264 359 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 FCGR2AP12318 317 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 PPP3CBP16298 524 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 MAGEA12P43365 314 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 CTBP2P56545 445 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 TSC22D1Q15714 1073 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.85□□□□□ -0.19
PALB2-205ENST00000567003 TMEM107Q6UX40 140 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 APOOLQ6UXV4 268 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 ATG4DQ86TL0 474 aaPredicted RBP13.85□□□□□ -0.19
PALB2-205ENST00000567003 OR10D3Q8NH80 312 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 BBS4Q96RK4 519 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 ACPTQ9BZG2 426 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 C12orf49Q9H741 205 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 PTGES2Q9H7Z7 377 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 YAE1D1Q9NRH1 226 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 PLSCR4Q9NRQ2 329 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 GIMAP4Q9NUV9 329 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 TAS2R9Q9NYW1 312 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 DMGDHQ9UI17 866 aaKnown RBP13.85□□□□□ -0.19
PALB2-205ENST00000567003 TMCO1Q9UM00 188 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 ABCG2Q9UNQ0 655 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 VDAC3Q9Y277 283 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
PALB2-205ENST00000567003 AP4B1Q9Y6B7 739 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 FREM1Q5H8C1 2179 aa13.85□□□□□ -0.19
PALB2-205ENST00000567003 GXYLT2A0PJZ3 443 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 A8MT66 165 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 CLOCKO15516 846 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 CXCL13O43927 109 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 NTN1O95631 604 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 JUNP05412 331 aaKnown RBP13.84□□□□□ -0.19
PALB2-205ENST00000567003 ACVR1BP36896 505 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 CAV1Q03135 178 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 BTKQ06187 659 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 TMEM44Q2T9K0 475 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 GALNT10Q86SR1 603 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 ZNF619Q8N2I2 560 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 CEP112Q8N8E3 955 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 GMPPAQ96IJ6 420 aaPredicted RBP13.84□□□□□ -0.19
PALB2-205ENST00000567003 TMEM185BQ9H7F4 350 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 NMRK1Q9NWW6 199 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 FAM120CQ9NX05 1096 aaKnown RBP13.84□□□□□ -0.19
PALB2-205ENST00000567003 NINJ2Q9NZG7 142 aa13.84□□□□□ -0.19
PALB2-205ENST00000567003 MAGED1Q9Y5V3 778 aaPredicted RBP13.84□□□□□ -0.19
PALB2-205ENST00000567003 ALPK2Q86TB3 2170 aa13.83□□□□□ -0.19
PALB2-205ENST00000567003 LINC01387J3KSC0 135 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 COQ9O75208 318 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 NDUFS7O75251 213 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms