RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SMNDC1O75940 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
RNF40-209ENST00000566703 RSL1D1O76021 490 aaKnown RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 MYL2P10916 166 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 CD8BP10966 210 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 DNAJB13P59910 316 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 RPS3AP61247 264 aaKnown RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 SLC29A2Q14542 456 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 POU4F3Q15319 338 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 RAET1LQ5VY80 246 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 NOXRED1Q6NXP6 359 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 ZNF474Q6S9Z5 364 aaPredicted RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 TMEM107Q6UX40 140 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 CXorf67Q86X51 503 aaPredicted RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 LRRC75A-AS1Q8N1F1 130 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 CEP112Q8N8E3 955 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 WFDC11Q8NEX6 87 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 MZB1Q8WU39 189 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 PIGTQ969N2 578 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 C1GALT1C1Q96EU7 318 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 ZNF764Q96H86 408 aaPredicted RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 C18orf12Q96KH6 178 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 IQCGQ9H095 443 aaKnown RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 RNF122Q9H9V4 155 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 DDX18Q9NVP1 670 aaKnown RBP13.52□□□□□ -0.25
RNF40-209ENST00000566703 ITPR3Q14573 2671 aa13.52□□□□□ -0.25
RNF40-209ENST00000566703 KIF2AO00139 706 aaPredicted RBP13.51□□□□□ -0.25
RNF40-209ENST00000566703 CRCPO75575 148 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CGAP01215 116 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CRYGSP22914 178 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
RNF40-209ENST00000566703 PRPH2P23942 346 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 GABRA3P34903 492 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CCT5P48643 541 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 SUCLG1P53597 346 aaKnown RBP13.51□□□□□ -0.25
RNF40-209ENST00000566703 FOXA1P55317 472 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 PRR5P85299 388 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 KIAA0040Q15053 153 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 TMEM44Q2T9K0 475 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CCDC153Q494R4 210 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 VWA1Q6PCB0 445 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 SH2D5Q6ZV89 423 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 UBQLNLQ8IYU4 475 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 METTL25Q8N6Q8 603 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CNEP1R1Q8N9A8 125 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CEP70Q8NHQ1 597 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 FIG4Q92562 907 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 HOXB13Q92826 284 aaPredicted RBP13.51□□□□□ -0.25
RNF40-209ENST00000566703 GFM2Q969S9 779 aaKnown RBP13.51□□□□□ -0.25
RNF40-209ENST00000566703 ZNF845Q96IR2 970 aaPredicted RBP13.51□□□□□ -0.25
RNF40-209ENST00000566703 FAM111AQ96PZ2 611 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 TXLNGYQ9BZA5 131 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 TBL1XR1Q9BZK7 514 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 RTN4RQ9BZR6 473 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 EMCNQ9ULC0 261 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 CCL27Q9Y4X3 112 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 MTORP42345 2549 aa13.51□□□□□ -0.25
RNF40-209ENST00000566703 C17orf51A8MQB3 221 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 FAM171A2A8MVW0 826 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 DEFB108AA8MXU0 73 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 C16orf97H3BN30 126 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 SLC28A1O00337 649 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 KCNH1O95259 989 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 PROCP04070 461 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 UROSP10746 265 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 PRPS2P11908 318 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 FCGR2AP12318 317 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 POU2F1P14859 743 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 FPR1P21462 350 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 UGT2B10P36537 528 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 CPOXP36551 454 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 MAP3K8P41279 467 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 VPS26BQ4G0F5 336 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 CFAP157Q5JU67 520 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 PRSS57Q6UWY2 283 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 FRMD7Q6ZUT3 714 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 MARCH3Q86UD3 253 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 KRTAP1-3Q8IUG1 177 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 CDC26Q8NHZ8 85 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 PINK1Q9BXM7 581 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 PAQR5Q9NXK6 330 aaPredicted RBP13.5□□□□□ -0.25
RNF40-209ENST00000566703 FLRT3Q9NZU0 649 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 NTMQ9P121 344 aa13.5□□□□□ -0.25
RNF40-209ENST00000566703 POLR3HQ9Y535 204 aaPredicted RBP13.5□□□□□ -0.25
RNF40-209ENST00000566703 MED12LQ86YW9 2145 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 SETD2Q9BYW2 2564 aaPredicted RBP13.49□□□□□ -0.25
RNF40-209ENST00000566703 A0A087WZY1 265 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 A0A1W2PPM1 405 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 TBX19O60806 448 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 SEC22BO75396 215 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 NKX2-2O95096 273 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 UTS2O95399 124 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 ANGPTL1O95841 491 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 NGFRP08138 427 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 INHBBP09529 407 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 IL11P20809 199 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 TBXA2RP21731 343 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 LCN1P31025 176 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 CRHR1P34998 444 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 CLDN20P56880 219 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms