RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SGCZQ96LD1 299 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 COL21A1Q96P44 957 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 SIGLEC12Q96PQ1 595 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 UBL7Q96S82 380 aaPredicted RBP10.55□□□□□ -0.72
KARS-207ENST00000566560 ADOQ96SZ5 270 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 G6PC3Q9BUM1 346 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 THUMPD3Q9BV44 507 aaKnown RBP10.55□□□□□ -0.72
KARS-207ENST00000566560 TIMMDC1Q9NPL8 285 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 P2RX2Q9UBL9 471 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 GMEB1Q9Y692 573 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 KCNE3Q9Y6H6 103 aa10.55□□□□□ -0.72
KARS-207ENST00000566560 EML6Q6ZMW3 1958 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 KMT2BQ9UMN6 2715 aaPredicted RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 TRAV17A0A0B4J275 112 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 TMEM247A6NEH6 219 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 TSPAN2O60636 221 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 ICOSLGO75144 302 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 UBOX5O94941 541 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 IL33O95760 270 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 BCHEP06276 602 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 CCL3P10147 92 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 ESRRAP11474 423 aaPredicted RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 CYP4B1P13584 511 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 CALB2P22676 271 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 RNF144AP50876 292 aaPredicted RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 MNAT1P51948 309 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 PNLIPRP2P54317 469 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.54□□□□□ -0.72
KARS-207ENST00000566560 GPAT3Q53EU6 434 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 ZNF766Q5HY98 468 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 PRAMEF20Q5VT98 475 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 HEPHL1Q6MZM0 1159 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 NANOGP8Q6NSW7 305 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 PCSK4Q6UW60 755 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 MDGA2Q7Z553 956 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 ZNF227Q86WZ6 799 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 C10orf111Q8N326 155 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 RBMXL3Q8N7X1 1067 aaKnown RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 TMEM178AQ8NBL3 297 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 PSD4Q8NDX1 1056 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 CHDHQ8NE62 594 aaPredicted RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 CATSPER1Q8NEC5 780 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 SPPL2AQ8TCT8 520 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 HGDQ93099 445 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 WBP1Q96G27 269 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 NSL1Q96IY1 281 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 SH3GL1Q99961 368 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 HES7Q9BYE0 225 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 ZNF350Q9GZX5 532 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 SLC25A18Q9H1K4 315 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 NANOGQ9H9S0 305 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 KLHL1Q9NR64 748 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 SACM1LQ9NTJ5 587 aa10.54□□□□□ -0.72
KARS-207ENST00000566560 THUMPD1Q9NXG2 353 aaKnown RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 CHCHD2Q9Y6H1 151 aaPredicted RBP10.54□□□□□ -0.72
KARS-207ENST00000566560 PRAMEF25A6NGN4 478 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 CCT8L1PA6NM43 557 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SLC28A2O43868 658 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 KIAA0513O60268 411 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 NME2P1O60361 137 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 TNFRSF21O75509 655 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 UTS2O95399 124 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 P04436 131 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 NR2F1P10589 423 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 GPX2P18283 190 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 NME2P22392 152 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SLC6A2P23975 617 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 EVI2BP34910 448 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SLC7A2P52569 658 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 PSME3P61289 254 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 ZNF169Q14929 603 aaPredicted RBP10.53□□□□□ -0.72
KARS-207ENST00000566560 ARHGAP11BQ3KRB8 267 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 FLYWCH1Q4VC44 716 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SLC6A19Q695T7 634 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 Q6ZS92 163 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 OLIG3Q7RTU3 272 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 NUP54Q7Z3B4 507 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 ZAR1Q86SH2 424 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 FBXW8Q8N3Y1 598 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 ANKFN1Q8N957 763 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 OR10A6Q8NH74 314 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 FBXO27Q8NI29 283 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 PAQR8Q8TEZ7 354 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 MAL2Q969L2 176 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SCMH1Q96GD3 660 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 TMEM19Q96HH6 336 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 NODALQ96S42 347 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SECISBP2Q96T21 854 aaKnown RBP10.53□□□□□ -0.72
KARS-207ENST00000566560 GPATCH1Q9BRR8 931 aaKnown RBP10.53□□□□□ -0.72
KARS-207ENST00000566560 OSBPL11Q9BXB4 747 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 KAT8Q9H7Z6 458 aaKnown RBP10.53□□□□□ -0.72
KARS-207ENST00000566560 METTL7AQ9H8H3 244 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 SH2D2AQ9NP31 389 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 A4GALTQ9NPC4 353 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 POLE3Q9NRF9 147 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 FBXO34Q9NWN3 711 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 NDE1Q9NXR1 346 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 KLRF1Q9NZS2 232 aa10.53□□□□□ -0.72
KARS-207ENST00000566560 FLRT3Q9NZU0 649 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms