RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 BTNL2Q9UIR0 455 aa12.64□□□□□ -0.39
HERPUD1-210ENST00000565966 PCDHGB4Q9UN71 923 aa12.64□□□□□ -0.39
HERPUD1-210ENST00000565966 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
HERPUD1-210ENST00000565966 LIPGQ9Y5X9 500 aa12.64□□□□□ -0.39
HERPUD1-210ENST00000565966 PRAMEF25A6NGN4 478 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 NPIPA2E9PIF3 369 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 E9PLN8 166 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 NPIPA3F8WFD2 350 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 GNB5O14775 395 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 BCKDKO14874 412 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 IL33O95760 270 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 IGKV1D-16P01601 117 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 IL6P05231 212 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 ALOX5P09917 674 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 CYP4B1P13584 511 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 GDF1P27539 372 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 POLR2JP52435 117 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 PSMD4P55036 377 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 STX1BP61266 288 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 GXYLT1Q4G148 440 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 CGB2Q6NT52 195 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 ANGPTL8Q6UXH0 198 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 GOT1L1Q8NHS2 421 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 RNF138Q8WVD3 245 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 JADE3Q92613 823 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 SARAFQ96BY9 339 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 RMND5BQ96G75 393 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 OR52E6Q96RD3 313 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 VKORC1Q9BQB6 163 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 ACTRT3Q9BYD9 372 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 UBQLN3Q9H347 655 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 PIGUQ9H490 435 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 GALNT9Q9HCQ5 603 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 DUSP22Q9NRW4 184 aa12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 PLEKHB1Q9UF11 243 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-210ENST00000565966 A0A0G2JND7 137 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 A1L4Q6 167 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 FAM234BA2RU67 622 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 SNPHO15079 494 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 CBR3O75828 277 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 TRAPPC6AO75865 159 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 KCNH1O95259 989 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 HPNP05981 417 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 UQCRC2P22695 453 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 PTPN6P29350 595 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 ATP4BP51164 291 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 LRRC74AQ0VAA2 488 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 BHLHB9Q6PI77 547 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 RPTNQ6XPR3 784 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 MAMDC2Q7Z304 686 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 C6orf120Q7Z4R8 191 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 FUNDC1Q8IVP5 155 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 ZNF808Q8N4W9 903 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 COX18Q8N8Q8 333 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 NEIL3Q8TAT5 605 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 FAM110BQ8TC76 370 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 ADAMTS15Q8TE58 950 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 PHF10Q8WUB8 498 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 CDS1Q92903 461 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 STACQ99469 402 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 INPP5KQ9BT40 448 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 TP63Q9H3D4 680 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 SERHL2Q9H4I8 314 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 SERHLQ9NQF3 203 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 GIN1Q9NXP7 522 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 ACAD8Q9UKU7 415 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 FAF1Q9UNN5 650 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 C15orf41Q9Y2V0 281 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 HRH3Q9Y5N1 445 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 KCNE3Q9Y6H6 103 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
HERPUD1-210ENST00000565966 ADAM10O14672 748 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 FADS1O60427 444 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 KCNK2O95069 426 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 UTS2O95399 124 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 CLDN1O95832 211 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 KRT16P08779 473 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 CDKN2CP42773 168 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 RFX3P48380 749 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 SMSP52788 366 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 IRX1P78414 480 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 POU6F2P78424 691 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 TOMM20Q15388 145 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 TIGD2Q4W5G0 525 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 WLSQ5T9L3 541 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 TMEM211Q6ICI0 200 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 XKRXQ6PP77 449 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 C3P1Q6ZMU1 363 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 MSANTD1Q6ZTZ1 278 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 GALNT10Q86SR1 603 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 WDSUB1Q8N9V3 476 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 ITLN2Q8WWU7 325 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms