RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NRBF2Q96F24 287 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SENP8Q96LD8 212 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PKP2Q99959 881 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ACBD6Q9BR61 282 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SLCO5A1Q9H2Y9 848 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ERVMER34-1Q9H9K5 563 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CCDC177Q9NQR7 707 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 DDX18Q9NVP1 670 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GID8Q9NWU2 228 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM181Q9P2C4 612 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 KLHL8Q9P2G9 620 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CD300AQ9UGN4 299 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RNF150Q9ULK6 438 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 MYO16Q9Y6X6 1858 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 MUC22E2RYF6 1773 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 A0A1B0GVG6 124 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 EEF2KO00418 725 aaKnown RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 MFSD11O43934 449 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PIAS1O75925 651 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ETS2P15036 469 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 STMN1P16949 149 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PSMB4P28070 264 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 LHX1P48742 406 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 TAF6P49848 677 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 GEMP55040 296 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 TMBIM6P55061 237 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PHEXP78562 749 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SF3B4Q15427 424 aaKnown RBP eCLIP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ADIPOQQ15848 244 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CA9Q16790 459 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 MEP1AQ16819 746 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 FAM83EQ2M2I3 478 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 KRBOX4Q5JUW0 171 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 LCN8Q6JVE9 175 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PID1Q7Z2X4 250 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 LDB1Q86U70 411 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SLC9B2Q86UD5 537 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 DHFR2Q86XF0 187 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 C1orf87Q8N0U7 546 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF557Q8N988 423 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 KCNE4Q8WWG9 221 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 LPGAT1Q92604 370 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PEX13Q92968 403 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PGAM5Q96HS1 289 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 FCRL4Q96PJ5 515 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 OR52B2Q96RD2 323 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 RANBP9Q96S59 729 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 NPY6RQ99463 290 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 C1orf50Q9BV19 199 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 POPDC3Q9HBV1 291 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SGK2Q9HBY8 427 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CRNNQ9UBG3 495 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ABCD2Q9UBJ2 740 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ACSL5Q9ULC5 683 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 AP3M1Q9Y2T2 418 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CEP192Q8TEP8 1941 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PTPRDP23468 1912 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 A0A1B0GTQ1 180 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CLEC18AA5D8T8 446 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 K7ENP7 123 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PSMD12O00232 456 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SDHDO14521 159 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 UBDO15205 165 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 LDB3O75112 727 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 GPC4O75487 556 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SUPT7LO94864 414 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 OR6B1O95007 311 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 OLFM2O95897 454 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ERVK-10P10266 1014 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ACP2P11117 423 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 S1PR1P21453 382 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 WARSP23381 471 aaKnown RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PTPN3P26045 913 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SULT1E1P49888 294 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 C21orf59P57076 290 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF155Q12901 538 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 KRT33BQ14525 404 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 MOGQ16653 247 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 DECR1Q16698 335 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 SLC39A12Q504Y0 691 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 NHSL2Q5HYW2 709 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 GLRA4Q5JXX5 417 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 IL23RQ5VWK5 629 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 REP15Q6BDI9 236 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ABRAXAS1Q6UWZ7 409 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CLEC18BQ6UXF7 455 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ZBTB49Q6ZSB9 765 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 GPR180Q86V85 440 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 FBXL14Q8N1E6 418 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 TTC30BQ8N4P2 665 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 DNAAF3Q8N9W5 541 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ATAD1Q8NBU5 361 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CLEC18CQ8NCF0 446 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PAPD5Q8NDF8 572 aaKnown RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 MAPK15Q8TD08 544 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ABTB1Q969K4 478 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 CENPNQ96H22 339 aaPredicted RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM79Q9BSE2 394 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 STARD5Q9NSY2 213 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 C20orf96Q9NUD7 363 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms