RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TRIM8Q9BZR9 551 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 Q9N2J8 555 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 NPDC1Q9NQX5 325 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PPP4R1LQ9P1A2 415 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 FBXL2Q9UKC9 423 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 CBLCQ9ULV8 474 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 EIF3LQ9Y262 564 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 TRPC5OSA6NMA1 111 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 PLOD2O00469 737 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNF195O14628 629 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 CBR3O75828 277 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 KITP10721 976 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 GABRA3P34903 492 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 HPCAL1P37235 193 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 STARP49675 285 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 AGFG1P52594 562 aaKnown RBP12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 SNTA1Q13424 505 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 DECR1Q16698 335 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 ACSF3Q4G176 576 aaPredicted RBP12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 RIPPLY2Q5TAB7 128 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 VASNQ6EMK4 673 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 OGFOD2Q6N063 350 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 TMEM81Q6P7N7 255 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 SEM1Q6ZVN7 128 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 OR2L13Q8N349 312 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 GPR151Q8TDV0 419 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 SLC9A6Q92581 669 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 ZBED6CLQ96FA7 236 aaPredicted RBP12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 RMND5BQ96G75 393 aaPredicted RBP12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 WDYHV1Q96HA8 205 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 YIPF4Q9BSR8 244 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 DSN1Q9H410 356 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 SLCO1B3Q9NPD5 702 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 NOP53Q9NZM5 478 aaKnown RBP12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 ATP6V1HQ9UI12 483 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 NF1P21359 2839 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 DNHD1Q96M86 4753 aa12.4□□□□□ -0.42
VPS9D1-204ENST00000565023 DOCK7Q96N67 2140 aa12.4□□□□□ -0.43
VPS9D1-204ENST00000565023 AHRRA9YTQ3 701 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 SCAMP2O15127 329 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 SLITRK5O94991 958 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 HOXD4P09016 255 aaPredicted RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 G6PDP11413 515 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 LBPP18428 481 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 PRPS1L1P21108 318 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 BMP5P22003 454 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 EVI2BP34910 448 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 RPL3P39023 403 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 FRKP42685 505 aaPredicted RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 DIO3P55073 304 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 C21orf58P58505 322 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 TLE4Q04727 773 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 HSP90B2PQ58FF3 399 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 MAVSQ7Z434 540 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 IFNEQ86WN2 208 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 RIMKLAQ8IXN7 391 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 PM20D2Q8IYS1 436 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 NAXEQ8NCW5 288 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 OR7A2PQ8NGA2 310 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 JADE3Q92613 823 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 NTNG2Q96CW9 530 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 MAELQ96JY0 434 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 MAGEB18Q96M61 343 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 SFXN2Q96NB2 322 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 SPOCK3Q9BQ16 436 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 LMF2Q9BU23 707 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 PRDM14Q9GZV8 571 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 ENKD1Q9H0I2 346 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 TAS2R10Q9NYW0 307 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 MED11Q9P086 117 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 SNX8Q9Y5X2 465 aa12.39□□□□□ -0.43
VPS9D1-204ENST00000565023 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 H0Y3Z8 333 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 KCNH1O95259 989 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 PSMG1O95456 288 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 EPPINO95925 133 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 IFI6P09912 130 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 ACP2P11117 423 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 DDX5P17844 614 aaKnown RBP12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 DPP4P27487 766 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 MSX1P28360 303 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 EPHA3P29320 983 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 SRD5A2P31213 254 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 CLDN8P56748 225 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 KRTAP10-9P60411 292 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 TFF3Q07654 80 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 RCAN2Q14206 197 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 HSPB2Q16082 182 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 CYP27C1Q4G0S4 372 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 FIGNL1Q6PIW4 674 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 MARCH3Q86UD3 253 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 KRTCAP2Q8N6L1 136 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 OR5M1Q8NGP8 315 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 C16orf58Q96GQ5 468 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 LURAP1Q96LR2 239 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms