RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PPP2R2AP63151 447 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 PRR5P85299 388 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 SLC18A2Q05940 514 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 PRSS53Q2L4Q9 553 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 ZCCHC12Q6PEW1 402 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 P4HA3Q7Z4N8 544 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 OR2M3Q8NG83 312 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 ZFP28Q8NHY6 868 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 LINC01560Q8TB33 94 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 DUSP19Q8WTR2 217 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 HOXB13Q92826 284 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 LRTM1Q9HBL6 345 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 NTMQ9P121 344 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 POLR3HQ9Y535 204 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 AP4B1Q9Y6B7 739 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 MED12LQ86YW9 2145 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 A0A1W2PNV4 684 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 SH3D21A4FU49 640 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 SLC22A20A6NK97 555 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 TRIM13O60858 407 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 HSPA4LO95757 839 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 NGFRP08138 427 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 FGF4P08620 206 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 KRT4P19013 534 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 GABRA3P34903 492 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 MAP3K8P41279 467 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 ASMTP46597 345 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 RPS3AP61247 264 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 KRTAP21-3Q3LHN1 58 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 SH2D4BQ5SQS7 431 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 FAM219BQ5XKK7 198 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 PAMR1Q6UXH9 720 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 CDRT4Q8N9R6 151 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 CDC26Q8NHZ8 85 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 UBLCP1Q8WVY7 318 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 MTERF3Q96E29 417 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 C1GALT1C1Q96EU7 318 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 ZBED6CLQ96FA7 236 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 FCRL1Q96LA6 429 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 CCT7Q99832 543 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 SLC39A3Q9BRY0 314 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 TBL1XR1Q9BZK7 514 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 LIME1Q9H400 295 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 REEP4Q9H6H4 257 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 PLEKHF2Q9H8W4 249 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 ACSS1Q9NUB1 689 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 PAQR5Q9NXK6 330 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 GALNT8Q9NY28 637 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 MED11Q9P086 117 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 EIF3LQ9Y262 564 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 PLEKHA6Q9Y2H5 1048 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 RPH3AQ9Y2J0 694 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF337Q9Y3M9 751 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF175Q9Y473 711 aa11.01□□□□□ -0.65
GTF3C1-204ENST00000564664 KIAA1549Q9HCM3 1950 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 A0A087WZY1 265 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 PDPK1O15530 556 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 EMC8O43402 210 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 SCO2O43819 266 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 NME6O75414 186 aaPredicted RBP11□□□□□ -0.65
GTF3C1-204ENST00000564664 NKX2-2O95096 273 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 ATE1O95260 518 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 TGM6O95932 706 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 SHBGP04278 402 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 KLK2P20151 261 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 GPC1P35052 558 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 FRKP42685 505 aaPredicted RBP11□□□□□ -0.65
GTF3C1-204ENST00000564664 MANFP55145 182 aaKnown RBP11□□□□□ -0.65
GTF3C1-204ENST00000564664 KEAP1Q14145 624 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 MLC1Q15049 377 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 RAET1LQ5VY80 246 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 LRIG3Q6UXM1 1119 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 Q6ZSR9 355 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
GTF3C1-204ENST00000564664 LUZP2Q86TE4 346 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 NATD1Q8N6N6 113 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 OR6Y1Q8NGX8 325 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 GFM2Q969S9 779 aaKnown RBP11□□□□□ -0.65
GTF3C1-204ENST00000564664 PPCDCQ96CD2 204 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 STARD4Q96DR4 205 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 EGLN2Q96KS0 407 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 EML4Q9HC35 981 aaKnown RBP11□□□□□ -0.65
GTF3C1-204ENST00000564664 MKS1Q9NXB0 559 aa11□□□□□ -0.65
GTF3C1-204ENST00000564664 OR2M5A3KFT3 312 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 B4DXG7 233 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 ALG1L2C9J202 215 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 NPHS1O60500 1241 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 UTS2O95399 124 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 ANGPTL1O95841 491 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 HRGP04196 525 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 CD8BP10966 210 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 FCGR2AP12318 317 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF17P17021 662 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 TBXA2RP21731 343 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 RPL3P39023 403 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 SERPINB4P48594 390 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 TMEM44Q2T9K0 475 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms