RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 XPNPEP2O43895 674 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MPZL2O60487 215 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ST6GAL1P15907 406 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ELAVL4P26378 380 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RBMS1P29558 406 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC5A2P31639 672 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IFNA8P32881 189 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KRT20P35900 424 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ETV5P41161 510 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GSSP48637 474 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ARL4DP49703 201 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TMBIM6P55061 237 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CDC42P60953 191 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OLR1P78380 273 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MVKQ03426 396 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZFP36L1Q07352 338 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FUT5Q11128 374 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SQSTM1Q13501 440 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TRA2AQ13595 282 aaKnown RBP eCLIP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NDUFA9Q16795 377 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EIPR1Q53HC9 387 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GPR107Q5VW38 600 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LAIR2Q6ISS4 152 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DHRS4L2Q6PKH6 230 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 WDR74Q6RFH5 385 aaPredicted RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ERI1Q8IV48 349 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SPARTQ8N0X7 666 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CACTIN-AS1Q8N1I8 211 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CA13Q8N1Q1 262 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR2L13Q8N349 312 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AGBL5Q8NDL9 886 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR7G2Q8NG99 324 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ADAMTS18Q8TE60 1221 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TANKQ92844 425 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MUL1Q969V5 352 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GTPBP3Q969Y2 492 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 C12orf43Q96C57 262 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RNF31Q96EP0 1072 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OTUB1Q96FW1 271 aaPredicted RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 C16orf58Q96GQ5 468 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TRNT1Q96Q11 434 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MAP3K3Q99759 626 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CMKLR1Q99788 373 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FNDC11Q9BVV2 318 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NMNAT1Q9HAN9 279 aaPredicted RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC24A3Q9HC58 644 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RLIMQ9NVW2 624 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SOHLH2Q9NX45 425 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KLHL28Q9NXS3 571 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NTMQ9P121 344 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RHCGQ9UBD6 479 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 WARS2Q9UGM6 360 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ACAD8Q9UKU7 415 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MGAT4BQ9UQ53 548 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MRPS2Q9Y399 296 aaKnown RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MN1Q10571 1320 aaPredicted RBP6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DSPPQ9NZW4 1301 aa6.93□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 A0A087WV62 115 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IGHV5-51A0A0C4DH38 117 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 A0A1W2PNU3 283 aaPredicted RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 A0A1W2PRQ8 180 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 BLACEA4D250 179 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TLCD2A6NGC4 264 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF99A8MXY4 864 aaPredicted RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FFAR1O14842 300 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PCDH17O14917 1159 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FGF17O60258 216 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR10H3O60404 316 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 BRINP1O60477 761 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COQ9O75208 318 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RDH16O75452 317 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SEC14L2O76054 403 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TNFSF15O95150 251 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GPR75O95800 540 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LGI1O95970 557 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AK1P00568 194 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MT-ND2P03891 347 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRB1P04280 392 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ATP1B1P05026 303 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HTR1AP08908 422 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ALOX5P09917 674 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCL4P13236 92 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NT5EP21589 574 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EPHA2P29317 976 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRKAR1BP31321 381 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MLLT3P42568 568 aaPredicted RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IDH2P48735 452 aaKnown RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MAN2A2P49641 1150 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CRISP1P54107 249 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC35A2P78381 396 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EIF3IQ13347 325 aaKnown RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DGCR6Q14129 220 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DEFB110Q30KQ9 67 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF628Q5EBL2 1059 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF311Q5JNZ3 666 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 XAF1Q6GPH4 301 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF770Q6IQ21 691 aaPredicted RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HEPHL1Q6MZM0 1159 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TCTN3Q6NUS6 607 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms