RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 POU3F4P49335 361 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 STK19P49842 368 aaPredicted RBP3.68□□□□□ -1.82
LINC00560-201ENST00000564593 HMGCS2P54868 508 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 SLC8A3P57103 927 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 RAB35Q15286 201 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 TRIP10Q15642 601 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 ZIC1Q15915 447 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 GCNT2Q8N0V5 402 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 RFESDQ8TAC1 157 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 ART4Q93070 314 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 TADA1Q96BN2 335 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 ELMO2Q96JJ3 720 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 VSTM2LQ96N03 204 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 THUMPD2Q9BTF0 503 aaKnown RBP3.68□□□□□ -1.82
LINC00560-201ENST00000564593 ZBP1Q9H171 429 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 COQ10BQ9H8M1 238 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 LPAR2Q9HBW0 351 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 C1orf123Q9NWV4 160 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 DHRS4-AS1Q9P1J3 65 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 KIF3AQ9Y496 699 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 RNF115Q9Y4L5 304 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 AP1M2Q9Y6Q5 423 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 FAM135AQ9P2D6 1515 aa3.68□□□□□ -1.82
LINC00560-201ENST00000564593 WDR7Q9Y4E6 1490 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 PRG4Q92954 1404 aaPredicted RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 RNF17Q9BXT8 1623 aaKnown RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 PARD3Q8TEW0 1356 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 RALGAPA1Q6GYQ0 2036 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 NEURL4Q96JN8 1562 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 SPHKAPQ2M3C7 1700 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 SRRM5B3KS81 715 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 GUCA1CO95843 209 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 HSPA5P11021 654 aaKnown RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 UQCRBP14927 111 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 RPL34P49207 117 aaKnown RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 METAP1P53582 386 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 NAPAP54920 295 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 TFDP1Q14186 410 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 LTB4RQ15722 352 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 PPP1R3AQ16821 1122 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 MICAQ29983 383 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 BTNL3Q6UXE8 466 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 HACD2Q6Y1H2 254 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 MYPOPQ86VE0 399 aaPredicted RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 CBWD2Q8IUF1 395 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 EFCAB13Q8IY85 973 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 TEX9Q8N6V9 391 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 ADIPOR1Q96A54 375 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 MCCC1Q96RQ3 725 aaPredicted RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 TBCDQ9BTW9 1192 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 RPP25Q9BUL9 199 aaKnown RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 ZNF581Q9P0T4 197 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 PRODH2Q9UF12 536 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 UHRF1BP1LA0JNW5 1464 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 DENND4BO75064 1496 aaPredicted RBP3.67□□□□□ -1.82
LINC00560-201ENST00000564593 MAGI2Q86UL8 1455 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 SCAPERQ9BY12 1400 aa3.67□□□□□ -1.82
LINC00560-201ENST00000564593 INSRP06213 1382 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 SYCP2Q9BX26 1530 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 GRIN2DO15399 1336 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 TET3O43151 1660 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 ATP10BO94823 1461 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 HCFC1P51610 2035 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 KIF1BO60333 1816 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 TRAV9-2A0A087WT02 112 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 TRBV7-9A0A0J9YWB2 115 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 A0A1B0GUL7 405 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 WASHC1A8K0Z3 465 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 CASKO14936 926 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 SRPX2O60687 465 aaPredicted RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 KBTBD11O94819 623 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 OR4F21O95013 312 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 PIGRP01833 764 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 CALCBP10092 127 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 THRBP10828 461 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 GATA2P23769 480 aaPredicted RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 CSRP3P50461 194 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 UBE2V2Q15819 145 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 CDKN3Q16667 212 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 ZNF311Q5JNZ3 666 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 SLC39A4Q6P5W5 647 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 LRRC8BQ6P9F7 803 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 LHFPL4Q7Z7J7 247 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 ERICH1Q86X53 443 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 FNDC8Q8TC99 324 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 C11orf24Q96F05 449 aaPredicted RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 ZBED6CLQ96FA7 236 aaPredicted RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 HPDLQ96IR7 371 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 PIWIL1Q96J94 861 aaKnown RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 NAP1L5Q96NT1 182 aaPredicted RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 VPS35Q96QK1 796 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 TIGARQ9NQ88 270 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 CUTCQ9NTM9 273 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 EPS15L1Q9UBC2 864 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 SH3BGRL2Q9UJC5 107 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 EXOSC1Q9Y3B2 195 aaKnown RBP3.66□□□□□ -1.82
LINC00560-201ENST00000564593 MFHAS1Q9Y4C4 1052 aa3.66□□□□□ -1.82
LINC00560-201ENST00000564593 CSAG2Q9Y5P2 127 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms