RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PNPLA6Q8IY17 1366 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 CCDC180Q9P1Z9 1646 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 FRMPD3Q5JV73 1810 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 TRAV26-1A0A087WT03 109 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 FAM74A7A6NL05 159 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 EPM2AB3EWF7 344 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 IDH3BO43837 385 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 IGHV3-9P01782 118 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 SNRPCP09234 159 aaKnown RBP2.09□□□□□ -2.07
CHD9-209ENST00000564255 PGCP20142 388 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 PPP2R1BP30154 601 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 SLC1A4P43007 532 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 BRCC3P46736 316 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 CSRP3P50461 194 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 MFAP2P55001 183 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 HILS1P60008 231 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 TNFRSF17Q02223 184 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 MESDQ14696 234 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 RAB35Q15286 201 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 ZIC1Q15915 447 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 EXOC3L2Q2M3D2 409 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 TMEM52BQ4KMG9 183 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 FAM74A3Q4VXF1 159 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 RUSC1-AS1Q66K80 236 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 ZNF613Q6PF04 617 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 BHLHE23Q8NDY6 225 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 CRYGNQ8WXF5 182 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 DNASE2BQ8WZ79 361 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 PIGCQ92535 297 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 TUBGCP3Q96CW5 907 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 MOCOSQ96EN8 888 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 DNAJA3Q96EY1 480 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 C7orf34Q96L11 122 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 TGM7Q96PF1 710 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 FN3KRPQ9HA64 309 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 MEPEQ9NQ76 525 aaPredicted RBP2.09□□□□□ -2.07
CHD9-209ENST00000564255 UTP6Q9NYH9 597 aaKnown RBP2.09□□□□□ -2.07
CHD9-209ENST00000564255 GNG12Q9UBI6 72 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 CRLS1Q9UJA2 301 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 ANAPC7Q9UJX3 599 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 NAALAD2Q9Y3Q0 740 aa2.09□□□□□ -2.07
CHD9-209ENST00000564255 IGHV3-16A0A0C4DH30 117 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 C11orf98E9PRG8 122 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 PPIHO43447 177 aaKnown RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 LCMT2O60294 686 aaKnown RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 B4GALT2O60909 372 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 HBQ1P09105 142 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 WNT2P09544 360 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 CALB2P22676 271 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 LMO2P25791 158 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 CALML3P27482 149 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 GRIA1P42261 906 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 CEBPDP49716 269 aaPredicted RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 AIF1P55008 147 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 RPS6P62753 249 aaKnown RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 NTHL1P78549 312 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 MAP2K1Q02750 393 aaPredicted RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 ZMYND11Q15326 602 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 CFAP221Q4G0U5 840 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 C2CD6Q53TS8 623 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 ACER2Q5QJU3 275 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 ATF7IP2Q5U623 682 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 TMEM225Q6GV28 225 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 CYS1Q717R9 158 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 NR2C2APQ86WQ0 139 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 CDH26Q8IXH8 852 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 OR8J1Q8NGP2 316 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 RNF139Q8WU17 664 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 POM121L2Q96KW2 1035 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 RIT2Q99578 217 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 POLR3FQ9H1D9 316 aaPredicted RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 SP140LQ9H930 580 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 ELL3Q9HB65 397 aaPredicted RBP2.09□□□□□ -2.08
CHD9-209ENST00000564255 ESM1Q9NQ30 184 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 HYPKQ9NX55 129 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 WDR45Q9Y484 360 aa2.09□□□□□ -2.08
CHD9-209ENST00000564255 IGHV3OR16-10A0A075B7F0 116 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 XKRY2A2RUG3 117 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 METTL21EPA6NDL7 271 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 FOXI3A8MTJ6 420 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 OR7A17O14581 309 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 STX7O15400 261 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 ARHGEF9O43307 516 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 STX11O75558 287 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 IGHG3P01860 377 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 IGFBP1P08833 259 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 ATP4BP51164 291 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 IDI1Q13907 227 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ELAVL3Q14576 367 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 GANABQ14697 944 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 NECTIN1Q15223 517 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 GGTA1PQ4G0N0 100 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 C9orf66Q5T8R8 295 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SEL1L2Q5TEA6 688 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SLX4IPQ5VYV7 408 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 RFWD3Q6PCD5 774 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SYT10Q6XYQ8 523 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 CEACAM19Q7Z692 300 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 OR4D5Q8NGN0 318 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SH3YL1Q96HL8 342 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms