RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 WDR75Q8IWA0 830 aaKnown RBP12.21□□□□□ -0.45
CLK3-213ENST00000563842 COX18Q8N8Q8 333 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 WDSUB1Q8N9V3 476 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 FAM83FQ8NEG4 500 aaPredicted RBP12.21□□□□□ -0.45
CLK3-213ENST00000563842 OR4K17Q8NGC6 315 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 OR14L1PQ8NHC6 308 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 LRRC8CQ8TDW0 803 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 CA5BP1Q8WTZ4 195 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 JADE3Q92613 823 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 ZNF75CPQ92670 426 aaPredicted RBP12.21□□□□□ -0.45
CLK3-213ENST00000563842 TESCQ96BS2 214 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 CHMP6Q96FZ7 201 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 RMND5BQ96G75 393 aaPredicted RBP12.21□□□□□ -0.45
CLK3-213ENST00000563842 G6PC3Q9BUM1 346 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 ACTRT3Q9BYD9 372 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 TBL1XR1Q9BZK7 514 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 RUBCNLQ9H714 662 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 SERHLQ9NQF3 203 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 ALKBH4Q9NXW9 302 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 PPP4R1LQ9P1A2 415 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 SPRR3Q9UBC9 169 aa12.21□□□□□ -0.45
CLK3-213ENST00000563842 DOCK7Q96N67 2140 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 HCFC1P51610 2035 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 GXYLT2A0PJZ3 443 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 SDHDO14521 159 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 FADS1O60427 444 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ACP2P11117 423 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ENDOUP21128 410 aaKnown RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 CRYZQ08257 329 aaKnown RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 C17orf67Q0P5P2 114 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 PMPCAQ10713 525 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 GANABQ14697 944 aaKnown RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 LASP1Q14847 261 aaKnown RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLK3-213ENST00000563842 EIPR1Q53HC9 387 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 WIPI1Q5MNZ9 446 aaPredicted RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 C1orf185Q5T7R7 199 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 NXNQ6DKJ4 435 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 VASNQ6EMK4 673 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 OR4F3Q6IEY1 312 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 CDC73Q6P1J9 531 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 SLC16A11Q8NCK7 471 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ADAMTS15Q8TE58 950 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 PIK3R3Q92569 461 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ABTB1Q969K4 478 aaPredicted RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 SDCCAG3Q96C92 435 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ZBTB18Q99592 522 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 BTBD2Q9BX70 525 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 OR2B2Q9GZK3 357 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 ACBD3Q9H3P7 528 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 PIGUQ9H490 435 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 CXorf36Q9H7Y0 433 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 PTGES2Q9H7Z7 377 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 MARCOQ9UEW3 520 aaPredicted RBP12.2□□□□□ -0.46
CLK3-213ENST00000563842 DKKL1Q9UK85 242 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
CLK3-213ENST00000563842 PRSS51A0A1B0GVH4 220 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 DUXAA6NLW8 204 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 E9PBE3 544 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 SCO2O43819 266 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 KCNK2O95069 426 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 UTS2O95399 124 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 NGFRP08138 427 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 HPGDP15428 266 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 HTR1EP28566 365 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 EPHA3P29320 983 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 CHRNB4P30926 498 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 S100A3P33764 101 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 SOAT1P35610 550 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 GAS1P54826 345 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 DSCR4P56555 118 aaPredicted RBP12.19□□□□□ -0.46
CLK3-213ENST00000563842 RIPPLY3P57055 190 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 NUP107P57740 925 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 HBA1P69905 142 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 LRRC74AQ0VAA2 488 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 DUSP5Q16690 384 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 ZNF630Q2M218 657 aaPredicted RBP12.19□□□□□ -0.46
CLK3-213ENST00000563842 TTMPQ5BVD1 217 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 SP5Q6BEB4 398 aaPredicted RBP12.19□□□□□ -0.46
CLK3-213ENST00000563842 AAGABQ6PD74 315 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 YRDCQ86U90 279 aaKnown RBP12.19□□□□□ -0.46
CLK3-213ENST00000563842 IFNEQ86WN2 208 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 ULK2Q8IYT8 1036 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 GLB1L3Q8NCI6 653 aaPredicted RBP12.19□□□□□ -0.46
CLK3-213ENST00000563842 OR10Q1Q8NGQ4 319 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 FAM110BQ8TC76 370 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 ACTRT2Q8TDY3 377 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 C16orf58Q96GQ5 468 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 MAELQ96JY0 434 aaKnown RBP12.19□□□□□ -0.46
CLK3-213ENST00000563842 C7orf26Q96N11 449 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 TIMP4Q99727 224 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
CLK3-213ENST00000563842 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms