RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KCTD4Q8WVF5 259 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 HTRA1Q92743 480 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 KAT2AQ92830 837 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 REPS1Q96D71 796 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 TMCO6Q96DC7 493 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 C1orf159Q96HA4 380 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 NSUN5Q96P11 429 aaKnown RBP9.22□□□□□ -0.93
SF3B3-204ENST00000563739 TNFRSF13CQ96RJ3 184 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 GRIP2Q9C0E4 1043 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 RAB17Q9H0T7 212 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 LRTM1Q9HBL6 345 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 ZNF225Q9UK10 706 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 ADAM29Q9UKF5 820 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 B3GALT5Q9Y2C3 310 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 SNX24Q9Y343 169 aa9.22□□□□□ -0.93
SF3B3-204ENST00000563739 IGLV3-32A0A0A0MS00 114 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 TCRBV9S1A1TA0A576 114 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GOLGA8RI6L899 631 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 CLOCKO15516 846 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 IGKV1D-16P01601 117 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 PNLIPRP2P54317 469 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 CASP9P55211 416 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 ARL4CP56559 192 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 STX5Q13190 355 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GTF2H2Q13888 395 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GTF2H2CQ6P1K8 395 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 FIGNL1Q6PIW4 674 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 B3GLCTQ6Y288 498 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 RPS27LQ71UM5 84 aaKnown RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 NUFIP2Q7Z417 695 aaKnown RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 NOA1Q8NC60 698 aaKnown RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 OR9A2Q8NGT5 310 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 OR10D3Q8NH80 312 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 STAG3L4Q8TBR4 150 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 POC1BQ8TC44 478 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 KLHL29Q96CT2 875 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 TSPAN17Q96FV3 270 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 TRMT61AQ96FX7 289 aaKnown RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GMPPAQ96IJ6 420 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 SERPINI1Q99574 410 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 CENPKQ9BS16 269 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 NTMT1Q9BV86 223 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 PLA2G12AQ9BZM1 189 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 DPH5Q9H2P9 285 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 IPPKQ9H8X2 491 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GRHL1Q9NZI5 618 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 PPP4R1LQ9P1A2 415 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 ING1Q9UK53 422 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 CFL2Q9Y281 166 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 GPR52Q9Y2T5 361 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 ACOT9Q9Y305 439 aa9.21□□□□□ -0.94
SF3B3-204ENST00000563739 UTP11Q9Y3A2 253 aaKnown RBP9.21□□□□□ -0.94
SF3B3-204ENST00000563739 A0A0J9YW62 118 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 A0A1W2PP18 115 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 C1orf226A1L170 272 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 FAM234BA2RU67 622 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 PPP6CO00743 305 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 CXCL13O43927 109 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 SSX4O60224 188 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 S100BP04271 92 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-204ENST00000563739 CSNK2A2P19784 350 aaPredicted RBP9.2□□□□□ -0.94
SF3B3-204ENST00000563739 GP5P40197 560 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 SLC12A2P55011 1212 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 C21orf58P58505 322 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 RAE1P78406 368 aaKnown RBP9.2□□□□□ -0.94
SF3B3-204ENST00000563739 RUNX1T1Q06455 604 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 SPOCK1Q08629 439 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 CALCOCO2Q13137 446 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 EFR3AQ14156 821 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 GANABQ14697 944 aaKnown RBP9.2□□□□□ -0.94
SF3B3-204ENST00000563739 MARCH3Q86UD3 253 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 MMGT1Q8N4V1 131 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 ZNF525Q8N782 197 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 CEP112Q8N8E3 955 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 PIWIL2Q8TC59 973 aaKnown RBP9.2□□□□□ -0.94
SF3B3-204ENST00000563739 ZNF524Q96C55 264 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 CPNE1Q99829 537 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 C12orf49Q9H741 205 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 NSMCE4AQ9NXX6 385 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 PRODH2Q9UF12 536 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 PCTPQ9UKL6 214 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 EMC9Q9Y3B6 208 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 AP4B1Q9Y6B7 739 aa9.2□□□□□ -0.94
SF3B3-204ENST00000563739 ESYT3A0FGR9 886 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 GOLGA6L10A6NI86 522 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 VWC2LB2RUY7 222 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 ZNF814B7Z6K7 855 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 EIF1AYO14602 144 aaKnown RBP9.19□□□□□ -0.94
SF3B3-204ENST00000563739 ADAMDEC1O15204 470 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 EFNA2O43921 213 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 OPN1LWP04000 364 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 CD3EP07766 207 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 LTA4HP09960 611 aaKnown RBP9.19□□□□□ -0.94
SF3B3-204ENST00000563739 FCGR2AP12318 317 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 CHN1P15882 459 aa9.19□□□□□ -0.94
SF3B3-204ENST00000563739 ADH6P28332 368 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms