RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 NR1H2P55055 460 aa16.77■□□□□ 0.28
NME3-204ENST00000563498 ZNF155Q12901 538 aaPredicted RBP16.77■□□□□ 0.28
NME3-204ENST00000563498 TCHHL1Q5QJ38 904 aaPredicted RBP16.77■□□□□ 0.28
NME3-204ENST00000563498 ANKRD34AQ69YU3 496 aa16.77■□□□□ 0.28
NME3-204ENST00000563498 OR6K3Q8NGY3 331 aa16.77■□□□□ 0.28
NME3-204ENST00000563498 C16orf78Q8WTQ4 265 aa16.77■□□□□ 0.28
NME3-204ENST00000563498 C11orf24Q96F05 449 aaPredicted RBP16.77■□□□□ 0.28
NME3-204ENST00000563498 ZNF382Q96SR6 550 aa16.77■□□□□ 0.28
NME3-204ENST00000563498 MRTO4Q9UKD2 239 aaKnown RBP16.77■□□□□ 0.28
NME3-204ENST00000563498 EMC9Q9Y3B6 208 aa16.77■□□□□ 0.28
NME3-204ENST00000563498 IGLV3-32A0A0A0MS00 114 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 ESYT3A0FGR9 886 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 MYO1GB0I1T2 1018 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 AQP8O94778 261 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 CHN1P15882 459 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 IL11P20809 199 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 TIA1P31483 386 aaKnown RBP eCLIP16.76■□□□□ 0.27
NME3-204ENST00000563498 CLK3P49761 638 aaKnown RBP16.76■□□□□ 0.27
NME3-204ENST00000563498 ACSM2AQ08AH3 577 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 STX5Q13190 355 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 SGCBQ16585 318 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 DECR1Q16698 335 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 ACSM2BQ68CK6 577 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 ZNF704Q6ZNC4 412 aaPredicted RBP16.76■□□□□ 0.27
NME3-204ENST00000563498 ZNF611Q8N823 705 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 OR5M1Q8NGP8 315 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 DUSP19Q8WTR2 217 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 GMPPAQ96IJ6 420 aaPredicted RBP16.76■□□□□ 0.27
NME3-204ENST00000563498 BBS4Q96RK4 519 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 ACPTQ9BZG2 426 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 RTN4RQ9BZR6 473 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 FANCFQ9NPI8 374 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 SIRT5Q9NXA8 310 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 STOML1Q9UBI4 398 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 ATRQ13535 2644 aa16.76■□□□□ 0.27
NME3-204ENST00000563498 HEATR5AQ86XA9 2040 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 FBN1P35555 2871 aaKnown RBP16.75■□□□□ 0.27
NME3-204ENST00000563498 CRLF1O75462 422 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 PSMG1O95456 288 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 IL33O95760 270 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 DDCP20711 480 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 CAPRIN1Q14444 709 aaKnown RBP16.75■□□□□ 0.27
NME3-204ENST00000563498 EXOC3L2Q2M3D2 409 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 SH2D4BQ5SQS7 431 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 UBAP2Q5T6F2 1119 aaKnown RBP16.75■□□□□ 0.27
NME3-204ENST00000563498 FAM219BQ5XKK7 198 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 STAC2Q6ZMT1 411 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 ZNF572Q7Z3I7 529 aaPredicted RBP16.75■□□□□ 0.27
NME3-204ENST00000563498 GGNQ86UU5 652 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 APIPQ96GX9 242 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 PAFAH2Q99487 392 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 TMEM204Q9BSN7 226 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 OR10A4Q9H209 315 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 Q9N2J8 555 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 FLRT3Q9NZU0 649 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 GRID1Q9ULK0 1009 aa16.75■□□□□ 0.27
NME3-204ENST00000563498 C19orf53Q9UNZ5 99 aaPredicted RBP16.75■□□□□ 0.27
NME3-204ENST00000563498 HS3ST1O14792 307 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 SS18L1O75177 396 aaPredicted RBP16.74■□□□□ 0.27
NME3-204ENST00000563498 SUPT7LO94864 414 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 SOX30O94993 753 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 ZNF17P17021 662 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 PSMD4P55036 377 aaKnown RBP16.74■□□□□ 0.27
NME3-204ENST00000563498 ATP5J2P56134 94 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 C17orf67Q0P5P2 114 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.74■□□□□ 0.27
NME3-204ENST00000563498 ZNF678Q5SXM1 525 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 GPRIN3Q6ZVF9 776 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 MARCH3Q86UD3 253 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 OR2L13Q8N349 312 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 METTL6Q8TCB7 284 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 REPIN1Q9BWE0 567 aaKnown RBP16.74■□□□□ 0.27
NME3-204ENST00000563498 HHATLQ9HCP6 504 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 GLRX2Q9NS18 164 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 PAQR5Q9NXK6 330 aaPredicted RBP16.74■□□□□ 0.27
NME3-204ENST00000563498 TAS2R7Q9NYW3 318 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 DMGDHQ9UI17 866 aaKnown RBP16.74■□□□□ 0.27
NME3-204ENST00000563498 ZNF180Q9UJW8 692 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 PYCARDQ9ULZ3 195 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 STK38LQ9Y2H1 464 aa16.74■□□□□ 0.27
NME3-204ENST00000563498 ROS1P08922 2347 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 UQCRHLA0A096LP55 91 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 UPK1AO00322 258 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 PLGP00747 810 aaPredicted RBP16.73■□□□□ 0.27
NME3-204ENST00000563498 ANXA4P09525 319 aaPredicted RBP16.73■□□□□ 0.27
NME3-204ENST00000563498 HMOX2P30519 316 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 NCBP2P52298 156 aaKnown RBP eCLIP16.73■□□□□ 0.275e-6■■□□□ 11.5
NME3-204ENST00000563498 CTBP2P56545 445 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 PRR5P85299 388 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 SLC7A5Q01650 507 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 KRTAP1-1Q07627 177 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 ZNHIT3Q15649 155 aaPredicted RBP16.73■□□□□ 0.27
NME3-204ENST00000563498 UNC50Q53HI1 259 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 TMEM107Q6UX40 140 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 LMF2Q9BU23 707 aaKnown RBP16.73■□□□□ 0.27
NME3-204ENST00000563498 PRRG4Q9BZD6 226 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 TBL1XR1Q9BZK7 514 aa16.73■□□□□ 0.27
NME3-204ENST00000563498 SERTM1A2A2V5 107 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms