RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ITPAQ9BY32 194 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SPRTNQ9H040 489 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SAP130Q9H0E3 1048 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF232Q9UNY5 417 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 CLDN16Q9Y5I7 305 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 VCANP13611 3396 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 TLCD2A6NGC4 264 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 K7ESF4 209 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 PIP5K1CO60331 668 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 THBS1P07996 1170 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 GKN3PP0CG01 181 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 OMPP47874 163 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 PLAURQ03405 335 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 MAP4K2Q12851 820 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 DOC2BQ14184 412 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 TMEM201Q5SNT2 666 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 MRPL2Q5T653 305 aaKnown RBP17.77■□□□□ 0.44
SMPD3-203ENST00000563226 ZCCHC12Q6PEW1 402 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 CAMKK1Q8N5S9 505 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 OR8D4Q8NGM9 314 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 NR4A3Q92570 626 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 FCGR1BQ92637 280 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 SPACA7Q96KW9 195 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 PLCL2Q9UPR0 1127 aa17.77■□□□□ 0.44
SMPD3-203ENST00000563226 ASXL3Q9C0F0 2248 aa17.77■□□□□ 0.43
SMPD3-203ENST00000563226 A0A1W2PPC1 479 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 NSA2O95478 260 aaKnown RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 SSTR4P31391 388 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 NCS1P62166 190 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 TIGD6Q17RP2 521 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 C11orf74Q86VG3 221 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 GALNT12Q8IXK2 581 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 GNPDA2Q8TDQ7 276 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 TMEM255BQ8WV15 326 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 MMABQ96EY8 250 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 CACYBPQ9HB71 228 aaKnown RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 PRDM6Q9NQX0 595 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 DTX4Q9Y2E6 619 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 EFCAB10A6NFE3 127 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 RHPN2P1A8MT19 583 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 NKX2-2O95096 273 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 DBIP07108 87 aaKnown RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 IFI6P09912 130 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 MYF5P13349 255 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 HTR2AP28223 471 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 RFX3P48380 749 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 GIPRP48546 466 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 OR1D5P58170 312 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 POU6F2P78424 691 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 CDK5Q00535 292 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 ZP2Q05996 745 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 STX4Q12846 297 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 DCTN2Q13561 401 aaKnown RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 OR8J1Q8NGP2 316 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 HOXB13Q92826 284 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 ALOXE3Q9BYJ1 711 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 CNOT2Q9NZN8 540 aaKnown RBP17.76■□□□□ 0.43
SMPD3-203ENST00000563226 LRIT1Q9P2V4 623 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 SLC7A7Q9UM01 511 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 COL6A3P12111 3177 aa17.76■□□□□ 0.43
SMPD3-203ENST00000563226 CACNA1IQ9P0X4 2223 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 BRINP1O60477 761 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 OR5F1O95221 314 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 INHBBP09529 407 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 NID1P14543 1247 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 GSTM3P21266 225 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 MAOAP21397 527 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 PSG6Q00889 435 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 FAM53BQ14153 422 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 EIPR1Q53HC9 387 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 OR4N2Q8NGD1 307 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 ACOT11Q8WXI4 607 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-203ENST00000563226 DNASE2BQ8WZ79 361 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 RIT1Q92963 219 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 SH3GL3Q99963 347 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 ANKRD19PQ9H560 264 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 FOLH1BQ9HBA9 442 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 PDE7BQ9NP56 450 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 PRTFDC1Q9NRG1 225 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 TLX2O43763 284 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-203ENST00000563226 CTNSO60931 367 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 KCNK2O95069 426 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 GPR4P46093 362 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 PCYT1AP49585 367 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 EMDP50402 254 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 TSPAN31Q12999 210 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 DECR1Q16698 335 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 PLAG1Q6DJT9 500 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 NRMQ8IXM6 262 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 PIGXQ8TBF5 258 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 TRUB1Q8WWH5 349 aaKnown RBP17.75■□□□□ 0.43
SMPD3-203ENST00000563226 GUCD1Q96NT3 240 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 OR5M11Q96RB7 305 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 BCL7BQ9BQE9 202 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 ARMC7Q9H6L4 198 aa17.75■□□□□ 0.43
SMPD3-203ENST00000563226 A0A1B0GVT2 93 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 CDHR4A6H8M9 788 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 SLC22A1O15245 554 aa17.74■□□□□ 0.43
SMPD3-203ENST00000563226 BCAT2O15382 392 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-203ENST00000563226 COQ9O75208 318 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms