RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF593O00488 134 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 YY2O15391 372 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TLX2O43763 284 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 GATBO75879 557 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 ZNF806P0C7X5 589 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 PEPDP12955 493 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 WNT3P56703 355 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 HTRA4P83105 476 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 MC2RQ01718 297 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC36A2Q495M3 483 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CERS6Q6ZMG9 384 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 DEF8Q6ZN54 512 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OR52N1Q8NH53 320 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SFT2D1Q8WV19 159 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 C11orf24Q96F05 449 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 LMLNQ96KR4 655 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OSGEPL1Q9H4B0 414 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 BRD9Q9H8M2 597 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TVP23BQ9NYZ1 205 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 B4GALT6Q9UBX8 382 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TRDV1A0A1B0GX56 115 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 ANKDD1BA6NHY2 528 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SCN2BO60939 215 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 EFCAB14O75071 495 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SOCS5O75159 536 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 ACAA1P09110 424 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 COX7A2P14406 83 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 PCGF2P35227 344 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SOX18P35713 384 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 KCNJ3P48549 501 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 PITPNBP48739 271 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 HLXQ14774 488 aaPredicted RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TSC22D1Q15714 1073 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TOMM5Q8N4H5 51 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OR8J1Q8NGP2 316 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 RPLP0P6Q8NHW5 317 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 IRF7Q92985 503 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 ABHD1Q96SE0 405 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CYSLTR2Q9NS75 346 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TRPS1Q9UHF7 1281 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CHST2Q9Y4C5 530 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 RASGRP1O95267 797 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 EIF4EP06730 217 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CD3GP09693 182 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 EBLN1P0CF75 366 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OSMP13725 252 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 LIMS1P48059 325 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 MESP2Q0VG99 397 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 MTAPQ13126 283 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 RGNQ15493 299 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 PAN3Q58A45 887 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 MSANTD1Q6ZTZ1 278 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 TPRG1Q6ZUI0 275 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SIAH3Q8IW03 269 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OR1M1Q8NGA1 313 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OR5M3Q8NGP4 307 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 OR6S1Q8NH40 331 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CMSS1Q9BQ75 279 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 CHST8Q9H2A9 424 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC22A11Q9NSA0 550 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 HS3ST2Q9Y278 367 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 PCDHB1Q9Y5F3 818 aa13.17□□□□□ -0.3
GTF3C1-203ENST00000562609 ALPK3Q96L96 1907 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 TRBV23-1A0A0A0MS06 115 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 CD8B2A6NJW9 211 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 GRM6O15303 877 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 RP2O75695 350 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 CD8BP10966 210 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 CD79BP40259 229 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 XCR1P46094 333 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 ARHGEF7Q14155 803 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 CD200R1LQ6Q8B3 271 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 C5orf46Q6UWT4 87 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 ADIPOR2Q86V24 386 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 ZBTB2Q8N680 514 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 IQCF1Q8N6M8 205 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SAMD12Q8N8I0 201 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 LRRC3BQ96PB8 259 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SPHK2Q9NRA0 654 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC25A13Q9UJS0 675 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 PRKAB1Q9Y478 270 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 DSPPQ9NZW4 1301 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 MCRIP1C9JLW8 97 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 EIF1BO60739 113 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 EPB42P16452 691 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 ACADLP28330 430 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms