RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 KCND3Q9UK17 655 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 CNOT11Q9UKZ1 510 aaKnown RBP9.54□□□□□ -0.88
USP3-219ENST00000561326 TCFL5Q9UL49 500 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 DTNAQ9Y4J8 743 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ENPP4Q9Y6X5 453 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 DOCK10Q96BY6 2186 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 GVINP1Q7Z2Y8 2422 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 A0A1W2PNU3 283 aaPredicted RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 PMS2P1A4D2B8 440 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 G3V2T6 193 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 H0YJX3 145 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 TO15178 435 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 KIAA0513O60268 411 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 GFRA3O60609 400 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 REM1O75628 298 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 SEC24DO94855 1032 aaPredicted RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 PRSS23O95084 383 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 IL33O95760 270 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 CAPNS1P04632 268 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NID1P14543 1247 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 HPGDP15428 266 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ZNF23P17027 643 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 IL12BP29460 328 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 DLSTP36957 453 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 STAT5AP42229 794 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 OR1E2P47887 323 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 GPR143P51810 404 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NR0B1P51843 470 aaKnown RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 ATP12AP54707 1039 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 SLC26A5P58743 744 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 DNASE1L3Q13609 305 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 GK3PQ14409 553 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 EBPQ15125 230 aaKnown RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 LIN52Q52LA3 116 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NPSR1Q6W5P4 371 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NDUFAF7Q7L592 441 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 TMPRSS7Q7RTY8 843 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 CARM1Q86X55 608 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 HIPK1Q86Z02 1210 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 TAGAPQ8N103 731 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 SLC34A3Q8N130 599 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 PACRGLQ8N7B6 248 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ZNF321PQ8N8H1 164 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ZNF527Q8NB42 609 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 OR4N2Q8NGD1 307 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 OR5K1Q8NHB7 308 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 M1APQ8TC57 530 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 TMBIM1Q969X1 311 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 C8orf44Q96CB5 159 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ZG16BQ96DA0 208 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NRBF2Q96F24 287 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ZNF300Q96RE9 604 aaPredicted RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 OSBPL10Q9BXB5 764 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 DEFB126Q9BYW3 111 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NXF5Q9H1B4 397 aaKnown RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 UBQLN4Q9NRR5 601 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 NDUFAF4Q9P032 175 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 FOXJ2Q9P0K8 574 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 ZNF443Q9Y2A4 671 aaPredicted RBP9.53□□□□□ -0.88
USP3-219ENST00000561326 DTX4Q9Y2E6 619 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 CEP250Q9BV73 2442 aa9.53□□□□□ -0.88
USP3-219ENST00000561326 EML6Q6ZMW3 1958 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 IGHV1-45A0A0A0MS14 117 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 NSG1A0A0A6YYJ2 146 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 TRBV11-1A0A0K0K1C0 115 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 SAC3D1A6NKF1 404 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 TMEM229AB2RXF0 380 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 H3BNH8 94 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 RAD1O60671 282 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 DNAJB5O75953 348 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 UMODP07911 640 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 RPS4Y1P22090 263 aaKnown RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 PEX2P28328 305 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 DNAJA1P31689 397 aaKnown RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 HSPA13P48723 471 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 PNLIPRP2P54317 469 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 FOXL2P58012 376 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP3-219ENST00000561326 ZNF141Q15928 474 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 NNATQ16517 81 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 BTBD16Q32M84 506 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 PLAG1Q6DJT9 500 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 PPP4R4Q6NUP7 873 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 IGF2-ASQ6U949 168 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 OLIG3Q7RTU3 272 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 VRK2Q86Y07 508 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 RAB43Q86YS6 212 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 C9orf40Q8IXQ3 194 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 CMIPQ8IY22 773 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 IL22RA1Q8N6P7 574 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 APCDD1LQ8NCL9 501 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 GPR32P1Q8NGA4 272 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 VANGL1Q8TAA9 524 aaPredicted RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 NUBPLQ8TB37 319 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 DIO2Q92813 273 aa9.52□□□□□ -0.89
USP3-219ENST00000561326 KIAA1143Q96AT1 154 aaPredicted RBP9.52□□□□□ -0.89
USP3-219ENST00000561326 IP6K3Q96PC2 410 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms