RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 TMCO6Q96DC7 493 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 CCDC120Q96HB5 630 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 OR7D2Q96RA2 312 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 SDR39U1Q9NRG7 319 aaPredicted RBP12.67□□□□□ -0.38
TPM1-230ENST00000561266 PNPLA3Q9NST1 481 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 SLC6A5Q9Y345 797 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 WIF1Q9Y5W5 379 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 ASH1LQ9NR48 2969 aaKnown RBP12.67□□□□□ -0.38
TPM1-230ENST00000561266 HEATR5AQ86XA9 2040 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 TRGV5A0A0B4J1U4 118 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 ABCB7O75027 752 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 SLC22A3O75751 556 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 TGDSO95455 350 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 CLDN1O95832 211 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 HPNP05981 417 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 GSNP06396 782 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 PGRP06401 933 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 TPOP07202 933 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 IDO1P14902 403 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 MASP1P48740 699 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 PRIM2P49643 509 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 CLNS1AP54105 237 aaKnown RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 RPP38P78345 283 aaKnown RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 SNTA1Q13424 505 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 SPDYE7PQ495Y7 208 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 CGB2Q6NT52 195 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 FAM83FQ8NEG4 500 aaPredicted RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 OR56A1Q8NGH5 318 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 GOT1L1Q8NHS2 421 aaPredicted RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 JADE3Q92613 823 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 CCDC115Q96NT0 180 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 OR52E6Q96RD3 313 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 PIGUQ9H490 435 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 ACKR4Q9NPB9 350 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 TCF7L2Q9NQB0 619 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 BTNL2Q9UIR0 455 aa12.66□□□□□ -0.38
TPM1-230ENST00000561266 FLNBO75369 2602 aaKnown RBP12.66□□□□□ -0.38
TPM1-230ENST00000561266 CACNA1CQ13936 2221 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 RNF103-CHMP3A0A140T963 221 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 A0A1B0GUH1 482 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 A1L4Q6 167 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 CYSRT1A8MQ03 144 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 AQP7O14520 342 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 SUSD5O60279 629 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 ZIC3O60481 467 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 TRAPPC6AO75865 159 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 DDX5P17844 614 aaKnown RBP12.65□□□□□ -0.38
TPM1-230ENST00000561266 KRT20P35900 424 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 POU6F2P78424 691 aaPredicted RBP12.65□□□□□ -0.38
TPM1-230ENST00000561266 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 RBPJQ06330 500 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 FUT5Q11128 374 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.389e-9■■■■□ 23.4
TPM1-230ENST00000561266 STX5Q13190 355 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 GSTA3Q16772 222 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 GTDC1Q4AE62 458 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 GXYLT1Q4G148 440 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 ANXA8L1Q5VT79 327 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 SAXO2Q658L1 398 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 RTL6Q6ICC9 239 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 COX18Q8N8Q8 333 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 FADS6Q8N9I5 356 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 GATSQ8NAP1 163 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 OR2M3Q8NG83 312 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 NEIL3Q8TAT5 605 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 DUSP19Q8WTR2 217 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 ITLN2Q8WWU7 325 aaPredicted RBP12.65□□□□□ -0.38
TPM1-230ENST00000561266 VPS33AQ96AX1 596 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 STACQ99469 402 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 NPAS1Q99742 590 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 CCDC28BQ9BUN5 200 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 BTBD2Q9BX70 525 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 DSN1Q9H410 356 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 LDAHQ9H6V9 325 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 NEUROD4Q9HD90 331 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 NPHS2Q9NP85 383 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 DUSP22Q9NRW4 184 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 FAM120CQ9NX05 1096 aaKnown RBP12.65□□□□□ -0.38
TPM1-230ENST00000561266 GIN1Q9NXP7 522 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 QPCTLQ9NXS2 382 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 ZIM2Q9NZV7 527 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 MED11Q9P086 117 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 MEMO1Q9Y316 297 aa12.65□□□□□ -0.38
TPM1-230ENST00000561266 CENPVL1A0A0U1RR11 272 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 OIP5O43482 229 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 HCN1O60741 890 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 KCNH1O95259 989 aa12.64□□□□□ -0.39
TPM1-230ENST00000561266 OXSR1O95747 527 aaPredicted RBP12.64□□□□□ -0.39
TPM1-230ENST00000561266 MATN1P21941 496 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms