RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ART4Q93070 314 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 WBP2Q969T9 261 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PPP1R14BQ96C90 147 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SLC25A36Q96CQ1 311 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CHMP6Q96FZ7 201 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZBED3Q96IU2 234 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 JSRP1Q96MG2 331 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CASD1Q96PB1 797 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 BBC3Q96PG8 261 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 SLC38A2Q96QD8 506 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CSF3RQ99062 836 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FMO2Q99518 471 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MAPKAP1Q9BPZ7 522 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RBM4BQ9BQ04 359 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 TMEM175Q9BSA9 504 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 DCTN5Q9BTE1 182 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MED10Q9BTT4 135 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FUCA2Q9BTY2 467 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ANKRD60Q9BZ19 345 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FRMD8P1Q9BZ68 369 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 PRRG3Q9BZD7 231 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 VCX3BQ9H321 246 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 NARFLQ9H6Q4 476 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 EGLN3Q9H6Z9 239 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SP140LQ9H930 580 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MAP6D1Q9H9H5 199 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 NHEJ1Q9H9Q4 299 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 IL1RL2Q9HB29 575 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LY9Q9HBG7 655 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LRRC4Q9HBW1 653 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 APOBEC3GQ9HC16 384 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 SLC25A19Q9HC21 320 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MRPS30Q9NP92 439 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 A4GALTQ9NPC4 353 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MYOZ2Q9NPC6 264 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 DCAF13Q9NV06 445 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 HIF1ANQ9NWT6 349 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 C2orf42Q9NWW7 574 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 MRPL39Q9NYK5 338 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 GPR83Q9NYM4 423 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TECRQ9NZ01 308 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 RCOR3Q9P2K3 495 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CTSFQ9UBX1 484 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FBXL4Q9UKA2 621 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PRDM4Q9UKN5 801 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 EMCNQ9ULC0 261 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PSMD13Q9UNM6 376 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RNF24Q9Y225 148 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 DHRS7Q9Y394 339 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RHBDD3Q9Y3P4 386 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TSC22D4Q9Y3Q8 395 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TIMM10BQ9Y5J6 103 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 KLF2Q9Y5W3 355 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 PEX16Q9Y5Y5 336 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 KAT6AQ92794 2004 aa1.84□□□□□ -2.12
RTF1-207ENST00000561076 PNPLA6Q8IY17 1366 aa1.84□□□□□ -2.12
RTF1-207ENST00000561076 ATP10DQ9P241 1426 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TRAV6A0A075B6T7 132 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 A0A0A6YYH2 397 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NPIPA5A0A0B4J1W7 369 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 IGHV4-28A0A0C4DH34 117 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZCWPW2A0A1B0GU75 182 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GSTTP1A0A1W2PQM5 241 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 A0A1W2PRD5 423 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PLSCR5A0PG75 271 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SH3PXD2BA1X283 911 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 LRP5LA4QPB2 252 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 LRIT2A6NDA9 550 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 FRG2CA6NGY1 282 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NKX6-3A6NJ46 265 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 A6NJ64 397 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ARHGEF33A8MVX0 844 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PATE3B3GLJ2 98 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 E7EWF7 191 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NPIPA5E9PKD4 350 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NEDD8-MDP1E9PL57 170 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 F5H6K3 240 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GOLGA6L19H0YKK7 550 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 BLOC1S5-TXNDC5H3BN57 136 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 J3KR12 359 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 K7ERI5 159 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CCL24O00175 119 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SLC1A7O00341 560 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 P2RY10O00398 339 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CYB561D2O14569 222 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR7A17O14581 309 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PPP1R2P9O14990 202 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MSH4O15457 936 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RS1O15537 224 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR10H3O60404 316 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TOM1O60784 492 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 KCNJ13O60928 360 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CCNB2O95067 398 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 AP2A1O95782 977 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PEX11BO96011 259 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 HPRP00739 348 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 KRT7P08729 469 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ANXA5P08758 320 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 HBQ1P09105 142 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MED14OSP0DP75 135 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms