RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 COPEO14579 308 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 MSTNO14793 375 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 RAF1P04049 648 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 HRGP04196 525 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 KRT4P19013 534 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 GABRA3P34903 492 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 CLK3P49761 638 aaKnown RBP14.64□□□□□ -0.07
SNX1-213ENST00000561026 PSMD4P55036 377 aaKnown RBP14.64□□□□□ -0.07
SNX1-213ENST00000561026 EEFSECP57772 596 aaKnown RBP14.64□□□□□ -0.07
SNX1-213ENST00000561026 PPP2R2AP63151 447 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 STX5Q13190 355 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 RAET1LQ5VY80 246 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 LIPMQ5VYY2 423 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 OR2A2Q6IF42 318 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 ZNF551Q7Z340 670 aaPredicted RBP14.64□□□□□ -0.07
SNX1-213ENST00000561026 P4HA3Q7Z4N8 544 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 MARCH3Q86UD3 253 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 MEIOBQ8N635 442 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 LRRN4CLQ8ND94 238 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 UBLCP1Q8WVY7 318 aaPredicted RBP14.64□□□□□ -0.07
SNX1-213ENST00000561026 STARD4Q96DR4 205 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 C3orf14Q9HBI5 128 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 LRTM1Q9HBL6 345 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 ZNF337Q9Y3M9 751 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 PTGDR2Q9Y5Y4 395 aa14.64□□□□□ -0.07
SNX1-213ENST00000561026 NIPBLQ6KC79 2804 aaeCLIP14.64□□□□□ -0.07
SNX1-213ENST00000561026 SMIM23A6NLE4 172 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 H0YC42 278 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 RGS14O43566 566 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 TNFRSF21O75509 655 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 ATE1O95260 518 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 UTS2O95399 124 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 RFX3P48380 749 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 SUCLG1P53597 346 aaKnown RBP14.63□□□□□ -0.07
SNX1-213ENST00000561026 TPD52P55327 224 aaPredicted RBP14.63□□□□□ -0.07
SNX1-213ENST00000561026 HSPB3Q12988 150 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 KEAP1Q14145 624 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 Q6ZSR9 355 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 C10orf107Q8IVU9 208 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 HOXB13Q92826 284 aaPredicted RBP14.63□□□□□ -0.07
SNX1-213ENST00000561026 GFM2Q969S9 779 aaKnown RBP14.63□□□□□ -0.07
SNX1-213ENST00000561026 C1GALT1C1Q96EU7 318 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 ZNF764Q96H86 408 aaPredicted RBP14.63□□□□□ -0.07
SNX1-213ENST00000561026 CCT7Q99832 543 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 PIGQQ9BRB3 760 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 NDRG3Q9UGV2 375 aa14.63□□□□□ -0.07
SNX1-213ENST00000561026 IGLV3-32A0A0A0MS00 114 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 GXYLT2A0PJZ3 443 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 OR2M5A3KFT3 312 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 CASKO14936 926 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 AZIN1O14977 448 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 PDPK1O15530 556 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 SMNDC1O75940 238 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNX1-213ENST00000561026 KCNH1O95259 989 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 IGKV1D-16P01601 117 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 PRPS2P11908 318 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 MAP3K8P41279 467 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 PCYT1AP49585 367 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 ADAM8P78325 824 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 PRR5P85299 388 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 SLC18A2Q05940 514 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 C17orf67Q0P5P2 114 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 POU4F3Q15319 338 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 DEFB113Q30KQ7 82 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 GLYR1Q49A26 553 aaPredicted RBP14.62□□□□□ -0.07
SNX1-213ENST00000561026 ANKRD26P1Q6NSI1 321 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 APOOLQ6UXV4 268 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 RNF165Q6ZSG1 346 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 C4orf33Q8N1A6 199 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 CNEP1R1Q8N9A8 125 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 OR5M1Q8NGP8 315 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 OR2T11Q8NH01 316 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 EPS8L3Q8TE67 593 aaKnown RBP14.62□□□□□ -0.07
SNX1-213ENST00000561026 SMPDL3BQ92485 455 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 FIG4Q92562 907 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 CIDECQ96AQ7 238 aaPredicted RBP14.62□□□□□ -0.07
SNX1-213ENST00000561026 FCRL1Q96LA6 429 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 TRMOQ9BU70 441 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 PINK1Q9BXM7 581 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 TBL1XR1Q9BZK7 514 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 TUBB1Q9H4B7 451 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 EQTNQ9NQ60 294 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 VPS13CQ709C8 3753 aa14.62□□□□□ -0.07
SNX1-213ENST00000561026 FLNAP21333 2647 aaKnown RBP14.62□□□□□ -0.07
SNX1-213ENST00000561026 A0A1W2PPR1 153 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 SEC14L5O43304 696 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 TBX19O60806 448 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 ANGPTL1O95841 491 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 SDC1P18827 310 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 GPC1P35052 558 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 CPOXP36551 454 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 KIR2DL2P43627 348 aaPredicted RBP14.61□□□□□ -0.07
SNX1-213ENST00000561026 CLDN20P56880 219 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 FAM27E3Q08E93 113 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 FOXD4Q12950 439 aaPredicted RBP14.61□□□□□ -0.07
SNX1-213ENST00000561026 GRAMD1BQ3KR37 738 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 VPS26BQ4G0F5 336 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 RFTN2Q52LD8 501 aaPredicted RBP14.61□□□□□ -0.07
SNX1-213ENST00000561026 VWA1Q6PCB0 445 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms