RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MEF2AQ02078 507 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 TUSC1Q2TAM9 212 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 CRTC2Q53ET0 693 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 CASP12Q6UXS9 341 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 PRICKLE2Q7Z3G6 844 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ABI3BPQ7Z7G0 1075 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 CLRN3Q8NCR9 226 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 OR8D4Q8NGM9 314 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 C1GALT1C1Q96EU7 318 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 IL17FQ96PD4 163 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 BHLHE41Q9C0J9 482 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 DNAJC27Q9NZQ0 273 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 COPS3Q9UNS2 423 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 NPTNQ9Y639 398 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 LAMA3Q16787 3333 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 GCM2O75603 506 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 TGFB1P01137 390 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 NUDT7P0C024 238 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 RHCEP18577 417 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF770Q6IQ21 691 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 VITQ6UXI7 678 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 OR6C4Q8NGE1 309 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 OR5AR1Q8NGP9 310 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC6A18Q96N87 628 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 IL4I1Q96RQ9 567 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 NMNAT1Q9HAN9 279 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 DLL4Q9NR61 685 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF275Q9NSD4 429 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 PFDN2Q9UHV9 154 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 PLAGL1Q9UM63 463 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ASF1AQ9Y294 204 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 CACNG2Q9Y698 323 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 ENPP4Q9Y6X5 453 aa13.11□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 ADAM11O75078 769 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 GBAP04062 536 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 TP53P04637 393 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 POU2F1P14859 743 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 GJA4P35212 333 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 PDE7AQ13946 482 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 ATAT1Q5SQI0 421 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 LRFN4Q6PJG9 635 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 LCTLQ6UWM7 567 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 CHMP1BQ7LBR1 199 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 AMZ2Q86W34 360 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 DCUN1D3Q8IWE4 304 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF740Q8NDX6 193 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 OR52I1Q8NGK6 324 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 GOT1L1Q8NHS2 421 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 RAD51AP1Q96B01 352 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC38A2Q96QD8 506 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 NLNQ9BYT8 704 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 ABCG5Q9H222 651 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 MYNNQ9NPC7 610 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 C11orf16Q9NQ32 467 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 HCN3Q9P1Z3 774 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF282Q9UDV7 671 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC23A2Q9UGH3 650 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
RABGGTA-220ENST00000560998 TRANK1O15050 2925 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 IGLON5A6NGN9 336 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 GTPBP1O00178 669 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 GPR171O14626 319 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 GMDSO60547 372 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 GASTP01350 101 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 PCCBP05166 539 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 FURINP09958 794 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 UGT2B7P16662 529 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 POU1F1P28069 291 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 RBMS1P29558 406 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 AQP1P29972 269 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 LCN1P31025 176 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 DRD3P35462 400 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 CDK3Q00526 305 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 DHODHQ02127 395 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 MAP4K2Q12851 820 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 RUNX3Q13761 415 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 NTRK2Q16620 822 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 FAM71E1Q6IPT2 247 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 RGS7BPQ6MZT1 257 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 FAM26EQ8N5C1 309 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 OR4K1Q8NGD4 311 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 ADAMTS14Q8WXS8 1223 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 TMEM203Q969S6 136 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 RBCK1Q9BYM8 510 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 HPF1Q9NWY4 346 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 KCND3Q9UK17 655 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 TEX13CA0A0J9YWL9 993 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms